| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0349 |
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| Symbol | |
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| ID | 8413198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 398534 |
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| End bp | 399736 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 645021917 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003179371 |
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| Protein GI | 257784154 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCTT CAATGTATTT ATTAGTCAAA AGAGCTTATT CAGCAAACAA AAAGAGAAAT
AGTTTGACGA TTCTTGCTGT TGGGATTTCA GTATTTCTTC TAACTGCTAT TTTGACTTTT
TCGACATCGT TCTATCATAA GATGATAGAA GAGATGAGAG TAGCTGACGC AGACGTTGTA
ACAGTTGCTT TTGGAGCTGG CGACAACGCC TTAAACTATA CGTATTTAAA CCTTTACACC
GATGATGATA TAAAACTTAT CAATCAGATT GATGGAGTGA CTGACGTTAC AGGAGTGAAG
GGTTTAAATG TTTCAGCGGT TACTTATGAT AACAATAAGA GAATACTTGC AAATTCACTT
AGAGGAATTG ATAGAAGCTA TCTAGACAAT TATAAAATTA GTTACACAGG TACATTCCCG
GATAAGGATG ATGAAATAAT CATTGGCGCA AGGATTGCCG ATGCCTCTGG TCTTCAAATA
GGGGATAGTA TTGATATTGA TTTTGGCTCG CAAAGAAAAA CATTTAAAAT TGTTGGGATT
TTAGATAAGC AAGAAGAACA GCTTTTCTCG ACATTTCCTA CCGAAATCAA TCAACTAATT
GCAACTTATT CAAACAGCTC TTTGTTTGAG ACTTCAAATT ACATTTATAT ATCTGCACGA
GTTAAAGATC AGGATCAGTT GTCAGAAGTT TCTAAAAAGA TTGTTGAAGC GATTAATACA
GACTCTAACC TTACTGAAGC TTTAGAAAAT ACAGGGCTTC ATCCACTTGT GGCAACAAGG
CAAAATGTAT TAGACATGCT TGATACTTGG TTCAGCTACA TCCTACTGTT TGTCTATGTC
GTCTCAGTTC TTCTTGGAAT AATTTCAACT GTAAATATTT TTAATATTTT TGTTATCACC
ATCCAAGAGC AATTCAAAGA TATTGCCGTT TATAAAATTG TCGGCGCTTC AATTAGACAA
ATCAGAAATA TCTTTATCTA TCAGAGCGTT TTTATTGGAA CAATGGGTTC AGTTTTAGGA
ATTCTACTTG GCTATCTCTT ATCAGCTATT GTTATTTTGC TGCTTCATTG GCCAATTAGG
TTTGATGTCT ATACCGTTCT TATTCCTTTT GCTATTGGAA TGACTTCTCC TATTTGTGCT
GGAGTTTGGT CATCTAAGAA ATCTGAAAAA GTTGATATTA ATATTTTAAC AGGGAATCTA
TAG
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| Protein sequence | MHSSMYLLVK RAYSANKKRN SLTILAVGIS VFLLTAILTF STSFYHKMIE EMRVADADVV
TVAFGAGDNA LNYTYLNLYT DDDIKLINQI DGVTDVTGVK GLNVSAVTYD NNKRILANSL
RGIDRSYLDN YKISYTGTFP DKDDEIIIGA RIADASGLQI GDSIDIDFGS QRKTFKIVGI
LDKQEEQLFS TFPTEINQLI ATYSNSSLFE TSNYIYISAR VKDQDQLSEV SKKIVEAINT
DSNLTEALEN TGLHPLVATR QNVLDMLDTW FSYILLFVYV VSVLLGIIST VNIFNIFVIT
IQEQFKDIAV YKIVGASIRQ IRNIFIYQSV FIGTMGSVLG ILLGYLLSAI VILLLHWPIR
FDVYTVLIPF AIGMTSPICA GVWSSKKSEK VDINILTGNL
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