Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0343 |
Symbol | |
ID | 8413191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 391957 |
End bp | 393345 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 645021910 |
Product | UDP-N-acetylglucosamine pyrophosphorylase |
Protein accession | YP_003179365 |
Protein GI | 257784148 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) |
TIGRFAM ID | [TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACTTA CTGCGATTGT CCTCGCCGCA GGCGAGGGAA CGCGCATGAA GTCCCACCAC CCTAAGATTG TGCACAAATT ACTAGATAAA CCTATTGTTT GGTGGAGTGT CAACGCCGCA ATTACTGCTG GCGCTGACCG CGTCATTGTA GTTGTTGGTA ACCACGCCGA CGAGGTTAAA TCTGCACTTT CTTGCTTCCC TAACCTTGAG TATGTTGCCC AGACCGAGCG TCTTGGTACT GGCCACGCAG TCAAGGTTGT AAAGGATGCT CTTGGTGGCT TCAAGGGACC CGTTGTTGTC ATTAATGGTG ACGCATCTTT GTTGCGCGCA CAGTCTATTC TCGACCTTGT CGCAGAAACT AAAGCTCATC ACAACGCGTG TACTGTACTT ACGATGACGC CGCCAGATCC AACTGGATAT GGTCGCGTTA TTTCTTCTAA CGGCCAGGTA ACTGCCATTA TTGAACATAA AGACGCTACA CCAGAGCAAC GCGAACAAGA ACGTGAATGC AACGTTGGTG TGTACTGCTT CTGTGGCGGA AGACTGACCG CAAACATCGA TCTTCTCGGC AACGATAACG TCCAAGGCGA GTACTACATC ACCGATATGG TGGGCCTCTA TGTAAGCCAA GGTGAGCCTG TTGCTGCCGT CCACGTTGAC GACTACAAAG AAGCGCTGGG AGTCAACTCC CGCTCCGAGC TTGCTGTTGC TACCCGTATC ATGCAGGAGC GCATCAACGA GCACTGGATG AGCCAAGGCG TCACCATGCT GGATCCAACC TCGGTTTGGA TTGGCCCCGA GGTCACGCTT GGCATGGATA CCGAGGTTCT CCCTCAGACC ATGCTCTATG GCAAAACCTC AATTGGCGAG AATTGCGTGA TAGGTCCTAA CACTCGTCTA ACCGATACCT GCGTTGGCAA CGACGCTATT GTCGACGAAA CTGTTGCCAT TAACGCACAA GTTGACGATT ACGCCACTTG TGGTCCTCGC GCTTATCTTC GTCCAGGTAC GCACCTTATG CCCCACGCTA AAGCCGGCAC ACATGTTGAA ATCAAAAACT CAACTATCGG CGAAGGCTCC AAGGTTCCTC ACCTCTCTTA CATTGGTGAT ACTACCATGG GCTCTGGCGT CAATATTGGT GCAGGCTCAA TTACGTGCAA TTACGATGGT TACCACAAGT TTAAGACCCA CATTGGCAAC AACGTCTTTG TTGGATCCGA TACCATGATG GTAGCACCTG TTTCAATTGG TGATGGCGCA CTTGTGGGGG CAAGTTCGTG CATTACAAAG GATGTACCAG CAGATGCGCT TGCACTCGAG CGCTCTGAGC AAAAAATTGT TGAGGGATAC GCCGCTCAGA GGCGTCACAA GCTTGAGAAA GAGGACTAG
|
Protein sequence | MPLTAIVLAA GEGTRMKSHH PKIVHKLLDK PIVWWSVNAA ITAGADRVIV VVGNHADEVK SALSCFPNLE YVAQTERLGT GHAVKVVKDA LGGFKGPVVV INGDASLLRA QSILDLVAET KAHHNACTVL TMTPPDPTGY GRVISSNGQV TAIIEHKDAT PEQREQEREC NVGVYCFCGG RLTANIDLLG NDNVQGEYYI TDMVGLYVSQ GEPVAAVHVD DYKEALGVNS RSELAVATRI MQERINEHWM SQGVTMLDPT SVWIGPEVTL GMDTEVLPQT MLYGKTSIGE NCVIGPNTRL TDTCVGNDAI VDETVAINAQ VDDYATCGPR AYLRPGTHLM PHAKAGTHVE IKNSTIGEGS KVPHLSYIGD TTMGSGVNIG AGSITCNYDG YHKFKTHIGN NVFVGSDTMM VAPVSIGDGA LVGASSCITK DVPADALALE RSEQKIVEGY AAQRRHKLEK ED
|
| |