| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0338 |
|---|
| Symbol | |
|---|
| ID | 8413186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | - |
|---|
| Start bp | 387010 |
|---|
| End bp | 387852 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 645021905 |
|---|
| Product | oxidoreductase FAD/NAD(P)-binding domain protein |
|---|
| Protein accession | YP_003179360 |
|---|
| Protein GI | 257784143 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATAAAA TCCTCGAAAA GACTCAGTTC TCAGAGAAGG TTTTTAAGTT CCGCATCGAG
GCACCACAGA TGGCTAAGCA TGCCCATGCT GGCCAGTTCC TAATGGTTCG CGCAAACGAG
TGTGGTGAGC GCGTCCCATT TACCTTTGCG GATTGGAATC CTGAAGAGGG TTGGGTCGAA
TTCATCTTTA TGGTAATTGG CAAGACTACC CAGATGCTTT CCACCTATGA GGTTGGTGAC
TCACTACAAG ACGTCACTGG TCCTCTGGGT GAGCCTACCG AGATGGGCGA AGGCAAATGG
GCAGTTATCG GCGGCGGCGT TGGCCTTGCT ATCGCCTTCC CTGTTGCTCG TCAACTTGTA
GCAGCTGGCC GTGAGGTTCA CGCAATCATG GGCGCTCGTA CCAAAGAGCT GCTGCTGCTT
GAGGATCAGT TCCGTTCCAT TTTGGACGAC GATCACATCC ACATCACCAC AGACGATGGT
TCTCTTGGTG AGAAGGGCGT TGTAACCGCA CCTCTCGAGC GTCTTCTACA GGACAAGCAG
GTTGACCGCG TATTCTGCGT TGGCCCAGTT CCTATGATGA AGTTCTCCAC TCTCACTGCT
GAGAAGTACA ACACGCCTAT CATCGCTTCT TTGAACCCAA TCATGGTCGA CGGTACTGGT
ATGTGCGGTT GCTGCCGTGT TGAAGTTGGT GGCGAGACCA AATTTGCTTG TGTTGACGGC
CCTGATTTTG ACGCAACCAA GGTTGACTGG AACGATCTTC GTGCGCGTCA GGCAGCCTAC
CTCACCGAGG AAGGTCAGTC CATTAAAGCT TACGAGGAGA CGAGGTGCGC ATGCCACAGG
TAA
|
|---|
| Protein sequence | MYKILEKTQF SEKVFKFRIE APQMAKHAHA GQFLMVRANE CGERVPFTFA DWNPEEGWVE
FIFMVIGKTT QMLSTYEVGD SLQDVTGPLG EPTEMGEGKW AVIGGGVGLA IAFPVARQLV
AAGREVHAIM GARTKELLLL EDQFRSILDD DHIHITTDDG SLGEKGVVTA PLERLLQDKQ
VDRVFCVGPV PMMKFSTLTA EKYNTPIIAS LNPIMVDGTG MCGCCRVEVG GETKFACVDG
PDFDATKVDW NDLRARQAAY LTEEGQSIKA YEETRCACHR
|
|---|
| |