| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0337 |
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| Symbol | |
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| ID | 8413185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 385625 |
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| End bp | 387028 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645021904 |
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| Product | glutamate synthase (NADPH), homotetrameric |
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| Protein accession | YP_003179359 |
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| Protein GI | 257784142 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCATGC CACAGGTAAA CGGTCGCTAC ATTCCAAACG TCAAGGCACC TCGTACAGCT
GACAACGAAG AGCCAGCTGC AGAGCGAGCA CAAGACTTCC GCCCTGTCGA CAAGGGCTTC
ACTAAAGAGA TGGCAATTGC AGAGGCAAAC CGCTGCTTGG ATTGTAAGAA TCCACTGTGT
GTTCAGGGCT GCCCTGTAAA CATCAACATT CCTCGTTTCA TCGAGGCTAT CCGTGCAGAG
GAGTTTGGTC GCGGTCTTGA CATCATCCGT GAGTCTTCTA TGCTTCCTGC AGTTTGTGGT
CGTGTTTGCC CACAGGAGAA CCAGTGCGAG GGCGTCTGCA TCATGGGTAA GCGCAGTGAA
CCAGTTGCTA TTGGTCAGCT CGAGCGCTTC CTTGGCGATC AGCCTGAGCT TGCTTCCAAG
CCAGCAATCG CACCAAAGAA CGGCAAGAAG GTTGCAGTTG TAGGCTCCGG TCCTTCTGGT
ATTGCTTGCG CTGGCGAGCT TGCTCGTAAC GGCTTTGACG TTACCGTTTT TGAGGCTTTC
TTCACCGGCG GCGGTGTTCT TGTCTACGGT ATTCCTGAGT TCCGTCTTCC AAAGGCTGTT
GTTAAACGCG AGATTGACGG TCTCCAAGAG CTGGGCGTTA AATTTGAGTA CAACTCTGTT
GTCGGTCGTA TCACCGATGC AGATGAGCTC TTTGAGCAGG GCTTTGACGC AATCTACATT
GCAACTGGCG CTGGTCTTCC AAAGCTTCTC AACATCCCTG GCGAGAATCT GCCTAACGTC
TTCTTTGCAA ACGAGTACCT CACCCGTGTT AACCTTATGA AGGCTAACAA GTTCCCTGAG
TACGATACTC CAACCAAGCA CGGCAAAAAC GTTGTTGTCT TTGGTGGAGG TAACGTTGCT
ATGGACGCTG TCCGTACTGC TAAGCGTCTT GGCGCTGAAC GTGCAATTAT TGCTTACCGT
CGTACTGAGG ACGAGATGCC TGCTCGTCGT GCAGAGCTTC ACCACGCAAA GGCTGAGGGT
GTTGAGGTAC TTCCTCTTGT CTCTCCTCTT GAGTTCATCG CTGGCGAAGA TGGCACAGTT
TGCGCAGTTC GCGTTCAAAA GATGGAGCTC GGCGAACCTG ACGCTGATGG ACGTCGTCGT
CCAGTACCTA TCGAGGGCGC CATCGAGGAC ATTCCTTGCG ATGTTGCAAT TTCTGCAATC
GGCACTAACG CTAACCCATT CGCAAAGATG ATCGGTGACA TTAAGCTCAA CAAGTGGGGC
TACATTGAGG CCGACGAAGA GGGCCGTACT TCCGATCCTC GCATCTGGGC TGGTGGCGAC
ATCGTGACTG GTGCTGCAAC CGTCATTCTG GCAATGGGCG CTGGTAAGAT AGCAGCCGCT
TCCATTACCA AACACATTGG TTAA
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| Protein sequence | MRMPQVNGRY IPNVKAPRTA DNEEPAAERA QDFRPVDKGF TKEMAIAEAN RCLDCKNPLC
VQGCPVNINI PRFIEAIRAE EFGRGLDIIR ESSMLPAVCG RVCPQENQCE GVCIMGKRSE
PVAIGQLERF LGDQPELASK PAIAPKNGKK VAVVGSGPSG IACAGELARN GFDVTVFEAF
FTGGGVLVYG IPEFRLPKAV VKREIDGLQE LGVKFEYNSV VGRITDADEL FEQGFDAIYI
ATGAGLPKLL NIPGENLPNV FFANEYLTRV NLMKANKFPE YDTPTKHGKN VVVFGGGNVA
MDAVRTAKRL GAERAIIAYR RTEDEMPARR AELHHAKAEG VEVLPLVSPL EFIAGEDGTV
CAVRVQKMEL GEPDADGRRR PVPIEGAIED IPCDVAISAI GTNANPFAKM IGDIKLNKWG
YIEADEEGRT SDPRIWAGGD IVTGAATVIL AMGAGKIAAA SITKHIG
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