| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0336 |
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| Symbol | |
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| ID | 8413184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 383842 |
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| End bp | 385467 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645021903 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179358 |
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| Protein GI | 257784141 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTAA AGTATCTTTT AAAGAATGCC AGTAAACGAA ACGTGATCAT TTTTGTATTA
GTACAAATTA TGAGTTCTTG CGTCGTTGCC GGTGTGGCTT TTTTACTGAG TGCACTTCTC
AATACGGTTT CTGAAGTCAT TATTTCAGGA GATATTGCTC TGTTACTTAA ATTTATAGGT
TTGTGCTGTA TATATGCTAT AGCAACTGGC ATCCTTCTTA TGCTACAGGG ATATGTGCGC
GCCCGCCTGG TTCGCGACAC CGTAATTAAG ATGAGAAATT CTGCCGTGAA GGCTTATTTG
CGCAGAAATG ATATTGTAGA CATGAATGAG AACAGTGCTG AGTTTCTTTC TCTTTTAAGT
CAGAATATGG ATACCATTGA AAAAGATTGG CTTGGCGGAC TGCTTGATGC ATTTTCTTCA
TGCTGCGAAA TTACTATTGC GAGTCTCTTA CTTTTGTATA TAAATCCAAT AGTGGCAGTA
ATTTCGATAC TTGTGATGGC AATTCCAACA ATCATTCCCG GAATGTTTAC AAAACAACTT
ACACATTGCC AAGAGGAGAT CGTAAAAAAT ACGGTTTCGT ATAACGGGCA GATTCGTGAC
ATATCGCTTG GAATTGATGT TATTAGGTCA TTTCATAAAG AAAGCAATTT TACAAACCGA
CACTTGATGG TTGCGCAGCA GTTGGAAGGT AAGAAGGCAC ATTTATCTGA AGTTACGGCT
CTTATATCTG GGCTTGTTAC AGCAATCTCG GTTTCATCTC AATTTATTAT TATGGGCATA
ACAGGTATTT TTGCGGTGCA AGGATTTGTT TCTCTTGGTA GTGTTGTGGC TGTAACACAG
CTGTCAGGTC AGGTAATTAC GCCCGCTTCA ACATTTGCTT CATTGCTTGG AAAAGTCAAG
GCTGCCTACC CGGTTTTAAA GGTGGTTATA CGCGACGATG AAGAAACTTC GTTCGACAAC
GAGGCACGGC ACTATGACGT AGAGCGTGAA ATTGAGCTAA AAAATGTTAC TTATAAATAC
CCTGATTCAA TTTCCGGAGT GTCTAAGATA TCTGCGCGTT TTAAGACCGG GAGGAAGTAT
GCGATTATTG GAAAAAGCGG GAGTGGAAAG AGTACGCTTT TAAAACTGAT TTCAGGCCAG
ATAGAACCTC AGGACGGAGA CATTCTGATT GACGGTTCAA GAGATATTTC ATGTGATCCG
GCAATGATTC ACCAGAATGT GTATTTGTTT GACGATACGC TAAAAAATAA CATTACGCTG
GGAAGTTCGT ATTCGAATGA GCAAATCGAT GAAGCTATTA AAAAGTCTGG CCTCTCAGAG
GTAGTTGCGG CTCTTCCAAA AGGACTTGAC ACTCCAGTGG AAGAGAACGG AAAGCGCTTC
TCAGGAGGTG AAAGACAGAG GATTGCTATT GCGCGAGCCT TACTGTATGG AAAGAAGTTA
CTGCTTGTTG ATGAAGCTAC GTCTGCATTG GACACACGCA TGGCTACTGA GGTCGAGAAT
AACCTGCTTG GTCTAAGCGG AGTTACCATG ATTGAGGTAA CTCATCATCT CAATGTTGCA
CAACAATCAA AGTTTGATGC CGTATTTGAA ATGACTCCAA GTGGGCTTTT GGAGATAAAA
CAATAG
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| Protein sequence | MSVKYLLKNA SKRNVIIFVL VQIMSSCVVA GVAFLLSALL NTVSEVIISG DIALLLKFIG
LCCIYAIATG ILLMLQGYVR ARLVRDTVIK MRNSAVKAYL RRNDIVDMNE NSAEFLSLLS
QNMDTIEKDW LGGLLDAFSS CCEITIASLL LLYINPIVAV ISILVMAIPT IIPGMFTKQL
THCQEEIVKN TVSYNGQIRD ISLGIDVIRS FHKESNFTNR HLMVAQQLEG KKAHLSEVTA
LISGLVTAIS VSSQFIIMGI TGIFAVQGFV SLGSVVAVTQ LSGQVITPAS TFASLLGKVK
AAYPVLKVVI RDDEETSFDN EARHYDVERE IELKNVTYKY PDSISGVSKI SARFKTGRKY
AIIGKSGSGK STLLKLISGQ IEPQDGDILI DGSRDISCDP AMIHQNVYLF DDTLKNNITL
GSSYSNEQID EAIKKSGLSE VVAALPKGLD TPVEENGKRF SGGERQRIAI ARALLYGKKL
LLVDEATSAL DTRMATEVEN NLLGLSGVTM IEVTHHLNVA QQSKFDAVFE MTPSGLLEIK
Q
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