| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0335 |
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| Symbol | |
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| ID | 8413183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 382706 |
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| End bp | 383611 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645021902 |
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| Product | helix-turn-helix domain protein |
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| Protein accession | YP_003179357 |
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| Protein GI | 257784140 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAAGGGA ATTCTTTAGG AGAGACCATT TATTCTCTTC GTCATAGTAA GGGATTGACG
CAGGAGCAGC TTGCAGAGGG TATCTGTTCT CCGGTTTCTC TTTCAAGAAT TGAAAATGGC
CGCCAGATGC CCTCCAAGGT AATTCTCGAC GCATTGTTAA GCAGACTTGG AGCGAGTACC
TATCAGCTTT GTGATGTTTT TTATCAAAGT GATTGCCAGC GTAGCTTTAA TGAGATTACA
AGACGAGCAA GTCTGCTTAT AGAAACAGGT AAAATCCAAC AAGGCCTATC CTTGCTGGAG
AGCTTGGATA AAAATGATGC ATCTCATGCA TTGGAGCGAC AGTCAGTTTT GCTTATACAG
GCAGCCGCAC AACTTAAGCA GAATAAAGAT CCCGAAGATT CATATGTCAA ATTATATGAG
GCTTTGGAGC TTACAAAGCC TCATATTGAC CTATCTGATT TTCGACATGA ACTTTTATCT
CCTATTGAAG CTGAAATAAT TGGTTTGATG GTTGTAGCGC TTCAACAAAA GGAAGCCCGT
ATTAAGGCTA TTCGAGTGGG AGAAGAACTT GCAAGAAACC TTTCTGATCA ACAATCGAGC
AGCAATGACT TTATGGTTGT CCGTATCAAC CTTGAGGTTA ATATATCTTC CTGTTTAGAC
CTTGAGGGAA GGTTTGAAGA AGCTGCTCAG CATGCGTATC TGGCAAGAGA TTTGAGTATT
GAAAGTCATG AACAGATACT TTTACCGGTG ATTTTTTATT TGATTGGTCG ATCTGAATTT
CGTAGTGGAA ATATTGAGAA GGCACGTTCA ATAATGCAGA CGATTATTCC GTATATGGAA
CTTATCGGCC AACATGATAA TGCGGAAATG GTACGCGCTT TTGTTGAAGA GAATCTAAGC
GCTTAA
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| Protein sequence | MKGNSLGETI YSLRHSKGLT QEQLAEGICS PVSLSRIENG RQMPSKVILD ALLSRLGAST
YQLCDVFYQS DCQRSFNEIT RRASLLIETG KIQQGLSLLE SLDKNDASHA LERQSVLLIQ
AAAQLKQNKD PEDSYVKLYE ALELTKPHID LSDFRHELLS PIEAEIIGLM VVALQQKEAR
IKAIRVGEEL ARNLSDQQSS SNDFMVVRIN LEVNISSCLD LEGRFEEAAQ HAYLARDLSI
ESHEQILLPV IFYLIGRSEF RSGNIEKARS IMQTIIPYME LIGQHDNAEM VRAFVEENLS
A
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