| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0332 |
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| Symbol | |
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| ID | 8413180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 380016 |
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| End bp | 380696 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645021899 |
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| Product | transaldolase |
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| Protein accession | YP_003179354 |
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| Protein GI | 257784137 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0176] Transaldolase |
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| TIGRFAM ID | [TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTTCT TTATTGACAC TGCGGATATC GATGAGATTT CTGAGGCTTT AAGCTGGGGC
TGCTTGGCAG GCGTTACTAC TAACCCATCA CTGTATGCAA AGATTGGTGG TAAGCTAGCT
GACTTTGAAT CTCATATGGT TAAGATTGCC CAGCTCTGCG AAGGTCTTCC TGTTTCTGCA
GAATCTACGG CAACAACAAC TGAGGGCATG ATTGAGGAAG GCCGTCACCT GGCTTCTCTT
GCTCCAAATA TTGTTGTTAA GCTTCCTATT TGTGCCGAGA GCCTTGCTGC TACTCATCAA
CTTGCTTCTG AGGGAATCCG TGTCAATATG ACGTTGATCT TCTCGGCACC TCAGGCCCTT
CTTGCTGCAA ATGCAGGTGC TCGTTATATT TCACCATTTG TTGGTCGTTT TGATGATATT
GGTGAGGACG GCATTGAGCA GCTTGCAACC GTAGTTTCAT GCATTGAGAA CTACGCATGG
GATAAAAACG TTGACCACAC CGTAGAGATT ATTACTGCTT CTGTTCGTAC ACCAAACCAC
GTAACTCAGG CAGCTCTGCT TGGTGCTGAT ATTGCAACCG TTCCATTTGG CGCTCTGAAG
AAGTGTTTGA AGCATCCTTT GACCGATGCC GGTCTTAAAT CTTTTGAGGC TGACTGGGAA
AAGGTTAAGG CTCAGCAATA A
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| Protein sequence | MKFFIDTADI DEISEALSWG CLAGVTTNPS LYAKIGGKLA DFESHMVKIA QLCEGLPVSA
ESTATTTEGM IEEGRHLASL APNIVVKLPI CAESLAATHQ LASEGIRVNM TLIFSAPQAL
LAANAGARYI SPFVGRFDDI GEDGIEQLAT VVSCIENYAW DKNVDHTVEI ITASVRTPNH
VTQAALLGAD IATVPFGALK KCLKHPLTDA GLKSFEADWE KVKAQQ
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