| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0331 |
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| Symbol | |
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| ID | 8413179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 379035 |
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| End bp | 379883 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645021898 |
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| Product | putative L-xylulose 5-phosphate 3-epimerase |
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| Protein accession | YP_003179353 |
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| Protein GI | 257784136 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3623] Putative L-xylulose-5-phosphate 3-epimerase |
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| TIGRFAM ID | [TIGR00542] hexulose-6-phosphate isomerase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGT ATCAGCTAGG ACTTTATGAG AAGGCCACTC CAACTGATCT TTCTTGGGAA
GAGCGCCTCA GCATAGCAGG AGAGTCTGGC TTTGATTATG TTGAGATCTC CGTTGATGAG
TCTGACGCTC GTCTTTCTCG CCTTGAATGG AGCGGTGAGG AGCGTGCAGC AGTTTGTCAG
GCAATGGTAA ACTCTGGTGT TCGCCTGGGC TCTATGTGCC TTTCTGGTCA TCGTAAGTAC
CCTTTTGGTT CTCGTGATCA GGCAACTCGT GAGCGTAGTC TTGAGATTAT GCAGAAGGCA
CTTGATCTTG CGGGTGACTT GGGACTTCAC ACCATTCAGC TTGCTGGCTA TGATGTGTAC
TACGAGGACG GTGCAGAGGA TACGCGCAAG TATTTTGAGG AGAACCTGGC TAAGGCTGTA
GAAATGGCTG CTAAGGCGGG TATTGTTATG GGCTTTGAGA CCATGGAAAC TCCTTTTATG
GATACGGTCG AGAAGGCCAT GCACTACGTA AACCTTATCA AGAGCCCTTA CCTTGGTGTT
TATCCCGACG CTGGCAATCT TACCAATGCA TCGTTTATTT ACGGCAATAC TGTTGCTGAT
GATATTGCTC TTGGTGCAGG TCATATCTTG GCAGCTCACC TAAAAGAGAC TGTTGCTGGC
GCTTATCGTG AGATTCCATT CTCTACGGGT ACCACTGACT ATGAGGGCGC TCTGTCACAG
CTTGTTCCTC AGGGTGTTAG ACGTTTTGTT GCAGAGATGT GGTACACCGG AAACGAGAAC
TGGAAAGAAG ATCTTGTCTT TGCTTCCACA TACGTTCGCA GCAAAATTGA TAAGGTGTTT
GAAGGGTAA
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| Protein sequence | MSKYQLGLYE KATPTDLSWE ERLSIAGESG FDYVEISVDE SDARLSRLEW SGEERAAVCQ
AMVNSGVRLG SMCLSGHRKY PFGSRDQATR ERSLEIMQKA LDLAGDLGLH TIQLAGYDVY
YEDGAEDTRK YFEENLAKAV EMAAKAGIVM GFETMETPFM DTVEKAMHYV NLIKSPYLGV
YPDAGNLTNA SFIYGNTVAD DIALGAGHIL AAHLKETVAG AYREIPFSTG TTDYEGALSQ
LVPQGVRRFV AEMWYTGNEN WKEDLVFAST YVRSKIDKVF EG
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