| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0320 |
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| Symbol | |
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| ID | 8413168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 366605 |
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| End bp | 367573 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645021887 |
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| Product | ROK family protein |
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| Protein accession | YP_003179342 |
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| Protein GI | 257784125 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0261245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATACG TATTGGGCAT TGATGTTGGT GGTACCACCA TTAAACTGGG ACTTTTCTCC
ACAGAAGGAG AGCTGCTTTC TGAGCAGAAG GTCAAGACGC CTGCACTTGA TAACGAGGAC
GGTTATCAGA CGGTAACCGA TGCAATTAGG CTTATTGTTC ATGGTCAAAA AGCAAGCCGC
AATGATGTTA TTGCGTGTGG TTTGGATATT CCAGGTCCTG TTGCAGATGA TGGAACCGTC
GGTTTTCTCG CTAATGTAGA CATTGACCCT GAGGGATTGG TACAGGCAAT TAATATGTGC
TTGCCAAACG CAACCATCGC GTTTGTTAAT GACGCAAACG CCGCGGCTTT GGGCGAAGCG
TGGGCTGGCG TTGCCGTGGG CGTGCCGTCG TTTGTGCTGA TTGCGTTGGG AACAGGTGTT
GGCGCAGGCG TTGTAGTAGA CGGTAAGCTT GCTGCAGGTG CTTTTGGCGC TGGTGGCGAG
ATTGGCCACA TTATTGTTGA GCCAGAAGAA ACTTTGACTT GTGGCTGCGG TCGTCATGGC
TGCCTGGAGC AGTACGCTTC CGCTAAGGGA GTTGTTCGCT TGTACCTGGA GGAATGCGCC
GCTCGTGGTG TTGTTCCTGT GAACATTGAG CACGAGACTG ATACCGTGTC CGTGTTTAGA
GCCCATGCTC AAGGAGATGA GTGCGCAACC CTTGCTATCC ACAAGATGTG TCACTACCTT
GGCCTTGCTA TGGCGCAGGT TTCGTGCGTG GTTGATCCTG CTATGTTTTT GATTGGCGGT
GGCGTAGCAG GCTCGTTTGC AACATTTGCG TTGGAGCTTC GCGAGACCTT TGAGCAGTAT
GCTCTACCGG TTAGCAAGGG CGCTCGTATT GAGGCCGCTA GCTTGGGTAA TCAGGCTGCA
ATGTATGGTT GCGCATATGA GGCGTTGCGT CTTAGAAAAG AACGCTTTGG CCAGGAGGAA
GCAGAGTAG
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| Protein sequence | MEYVLGIDVG GTTIKLGLFS TEGELLSEQK VKTPALDNED GYQTVTDAIR LIVHGQKASR
NDVIACGLDI PGPVADDGTV GFLANVDIDP EGLVQAINMC LPNATIAFVN DANAAALGEA
WAGVAVGVPS FVLIALGTGV GAGVVVDGKL AAGAFGAGGE IGHIIVEPEE TLTCGCGRHG
CLEQYASAKG VVRLYLEECA ARGVVPVNIE HETDTVSVFR AHAQGDECAT LAIHKMCHYL
GLAMAQVSCV VDPAMFLIGG GVAGSFATFA LELRETFEQY ALPVSKGARI EAASLGNQAA
MYGCAYEALR LRKERFGQEE AE
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