| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0316 |
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| Symbol | |
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| ID | 8413164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 362032 |
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| End bp | 362481 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645021883 |
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| Product | large conductance mechanosensitive channel protein |
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| Protein accession | YP_003179338 |
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| Protein GI | 257784121 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000219825 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.3753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAGT TTTTAGAAGA GTTTAAAGAA TTTATCCAGC AGGGCAATGT CATGGATATG
GCTATTGGTA TCATCATTGG TGGAGCATTT ACCGCTATTG TTACCTCCCT TGTCAATGAC
ATCATCAACC CATTCATTAA GTTAATCTCT GGTGGCGGTA CTGAGGTTTC TGGTCTTTCT
ATTCCAGTTC CTGGCACCCA GAACGGCATT GACTTTGGTG CGTTCATCAG CGCAATCATC
AACTTCCTGA TTATTGCATT CATTGTCTTC TGCATGGTTA AAGCCCTCAA CAAGTTCATG
AAAGCTTCCA AGCTTGAGAA AGATAAAGAA GAGGCTGTTG AAGAGGTTGC AGCTCCACAC
TGCCCACATT GCCTCGAAGA GGTTAAGGAA GGCGCAACTC GCTGCCCACA CTGCACTGGT
GAGATTGAGG GCGGCGCACA CGCTGCGTAA
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| Protein sequence | MKKFLEEFKE FIQQGNVMDM AIGIIIGGAF TAIVTSLVND IINPFIKLIS GGGTEVSGLS
IPVPGTQNGI DFGAFISAII NFLIIAFIVF CMVKALNKFM KASKLEKDKE EAVEEVAAPH
CPHCLEEVKE GATRCPHCTG EIEGGAHAA
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