| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0312 |
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| Symbol | |
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| ID | 8413160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 358149 |
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| End bp | 358769 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 645021879 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003179334 |
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| Protein GI | 257784117 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000380117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.28635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGAGGC GACCACAAAC AGAAAGTTGT GACACACGTT ACAGACTTCT TAAATCTGCA
GAGCAAGAGT TTGCTTTACA GGGATACGAC AAAGCTTCAC TTAGGCAGAT TTGTGCACAT
GCAGGCGTTA CTACAGGCGC TCTCTATTTC TTCTTTGATA ATAAAGAGGA TCTCTTTAAA
AATGTTTTGA TTCCTATAAC TGAAGGTGCA GTTCGGATTC TAGAGGATTA CAAAAATCAT
CTGCTGGTTT CTGGTGAAAG AAATCTTGAA GATACTCCTT TGGGCGATAA AGAAACTCTT
GATAAATTTT TAGACCTTTT ATACGGCAAT AGGTACGTGG TGCGGATTCT TGTGAACAAC
CGAGAAAATC AACATGTTGT TCGTTTCTTT GAAGAATTGA CCGAGGTCAT TTCTTCAACA
ATTAGAGCTA TTCTTTATCC TAATGTTGCG CAGGTTAAGC CCTATGATGA GTTCATTATT
ACGTGGCTTG CACAAACTGA GATGACCACT ATTGTCAATA TTCTTAAAAA TGATGAGACT
CGTGAAGAGG CTGATGGTCA CATTAATTCA GCAGTAATGT TCACACAAGG TGGCATTAAG
GCCTTAGTTG ATGAACATTA A
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| Protein sequence | MSRRPQTESC DTRYRLLKSA EQEFALQGYD KASLRQICAH AGVTTGALYF FFDNKEDLFK
NVLIPITEGA VRILEDYKNH LLVSGERNLE DTPLGDKETL DKFLDLLYGN RYVVRILVNN
RENQHVVRFF EELTEVISST IRAILYPNVA QVKPYDEFII TWLAQTEMTT IVNILKNDET
REEADGHINS AVMFTQGGIK ALVDEH
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