| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0305 |
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| Symbol | |
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| ID | 8413153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 352235 |
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| End bp | 353197 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645021872 |
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| Product | glycoside hydrolase family 25 |
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| Protein accession | YP_003179327 |
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| Protein GI | 257784110 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.655151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTTTTA ACAGCTCACA TAAAAGCAAG AAAACGAGAA ACTCTACAAC TCGTTCTAAA
ACTAAACATA CGCCTGTTTC TGCAAACGCC TTTAAACGTA AGCAGCAGGC AATGCATACA
CTTGGGAAAA ATTCCAAGAA CAACCCCATT GTTACATGGG GACTCGTTAT GCTGGCTATT
GTGTTTGTAC TGGCATTACT GCAATCGTGT CAGGGACTTT TTTCTCTATC TTTTAATAAC
AACTGGATTG TCAAAAACGA AGTCCCGTAT GAGTGGGAAA ACCTCAGCTA CGATGCAACA
GGACGTGCAC ATTATATTGT AGATGGAGAA GAACTAACGC GTACAGGCGT AGACGTCTCT
TCTCACCAAG GATCTATTGA CTGGGAGTCC GTTGCAGCCG ATAACATTCA GTTTGCTATG
CTTCGCATTG GTTACCGAGG CTCCACTGAA GGTGGCATTC GCGCTGACGA GCTCTTTGAA
ACCAACCTAA AGAGCGCGCA AAACGCCGGC CTTGATGTGG GCGTGTACTT CTTCTCACAG
GCTATTAACG TGGACGAAGC TCGCGAAGAA GCCGCTTTTG TTCTACAACA ACTAAAAGAA
GCAGGAGTTA CAAAACTTAA TCTTCCTGTT GCATTTGACC TGGAACCTTC TCCCGATTAC
AGCGGTCGCG CCGATAACCT TTCCCCTGCA GAAACTAACG CTATTGCGCG CGCGTTTTGT
GCCACCATTC AAGAAGCAGG ATACCGTGTC ATTGTCTATG GCAACAAAGT TGATTTGGAT
CGTTTTGATC TTGTCTCACT TGACGAGCCT ATATGGCTGG CACAATACGT CGATCAGCCT
GACGTAAACT TTAACTTTTT GATATGGCAA TACACCTCAA CAGGACAAGT TAATGGTATT
ACCGGTTCAG TTGATTTAAA TCTGGACTTC TCTAACGTTT CTACAAGAAA GAATCAAAAA
TAG
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| Protein sequence | MIFNSSHKSK KTRNSTTRSK TKHTPVSANA FKRKQQAMHT LGKNSKNNPI VTWGLVMLAI
VFVLALLQSC QGLFSLSFNN NWIVKNEVPY EWENLSYDAT GRAHYIVDGE ELTRTGVDVS
SHQGSIDWES VAADNIQFAM LRIGYRGSTE GGIRADELFE TNLKSAQNAG LDVGVYFFSQ
AINVDEAREE AAFVLQQLKE AGVTKLNLPV AFDLEPSPDY SGRADNLSPA ETNAIARAFC
ATIQEAGYRV IVYGNKVDLD RFDLVSLDEP IWLAQYVDQP DVNFNFLIWQ YTSTGQVNGI
TGSVDLNLDF SNVSTRKNQK
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