| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0303 |
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| Symbol | |
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| ID | 8413151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 350507 |
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| End bp | 351529 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645021870 |
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| Product | L-asparaginase, type I |
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| Protein accession | YP_003179325 |
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| Protein GI | 257784108 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00519] L-asparaginases, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.615084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAGAAAC TTTTATTGAT GGCAACAGGA GGCACTATTG CTTCTGTTTC CACTGAATCG
GGCTTGGCTC CTTCACTTTC AGGAGAAGAA CTTTTGGCCA ACGTCCCTCT TGTTCATGAC
CTCTGTAAAT TTGATTTCCA GCAAGTCATG AATATCGACA GCACTAATAT GCGTCCTCAA
AACTGGCTCC AGATTAGAGA CGCCATTATT GAGTCATACG ATACCTACGA CGGCTTTATC
ATTCTTCACG GCACCGATAC TATGGCATAT ACCGCAGCTG CCCTCTCCTA CCTCATTCAA
AATAGCGAGA AACCCATTGT GCTCACAGGC TCTCAACAGC CAATGGCAAA TCCATTTACT
GATGCCAAAC TCAACCTCTA CCACTCCGTT CTTTACGCAC TCGACAACAA AAGCGCTGGA
GTTGTTGTGG TCTTTGGCAA CGAGGTTATT GCAGGCACCC GCGCCCACAA GCAGCGCACG
CTCAGCTTCA ATGCATTTAC CAGCATGAAT TATCCACCAC TTGCTCACAT TCGTGGCAAC
AAGATTATTC GTAGCGCGCC AAATAACGAG CAGGTAGAGG GTGGTCTTGT TACCTACAAA
ACACTCAACA CACGCGTCAT TGTGCTTAAG CTGACTCCAG AGCTTAATCC ATCTATCTTC
TATCTTCTGA AAAACGACTA CGATGCCATT GTGCTTGAAA CCTTTGGTAT TGGTGGCATC
CCCTCATACG ATGGCTCTTA CGAAGAAGCT ATCACCGATT GGATTGCTTC TGGTCGCACG
GTTGTTATTA CTACACAGGT CCCTGAAGAG GGGCTTGACC TTGGTGTTTA CGAGGTTGGT
AGGACCTATC AAGATATGCC TGGTGTTCTC TCTGGAGACG ATATGACCAC CGAAGCCTTG
GTTGCAAAAA CCATGTGGAT ACTTGGTCAG ACCTCAGATC AACGCGAGCA AGAAAAATTG
TTTTACCAGG TAATTTGTAA CGACAGAATT CCACAGCCCG TAGATACAAA AATTTGCGAG
TAG
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| Protein sequence | MKKLLLMATG GTIASVSTES GLAPSLSGEE LLANVPLVHD LCKFDFQQVM NIDSTNMRPQ
NWLQIRDAII ESYDTYDGFI ILHGTDTMAY TAAALSYLIQ NSEKPIVLTG SQQPMANPFT
DAKLNLYHSV LYALDNKSAG VVVVFGNEVI AGTRAHKQRT LSFNAFTSMN YPPLAHIRGN
KIIRSAPNNE QVEGGLVTYK TLNTRVIVLK LTPELNPSIF YLLKNDYDAI VLETFGIGGI
PSYDGSYEEA ITDWIASGRT VVITTQVPEE GLDLGVYEVG RTYQDMPGVL SGDDMTTEAL
VAKTMWILGQ TSDQREQEKL FYQVICNDRI PQPVDTKICE
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