| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0291 |
|---|
| Symbol | |
|---|
| ID | 8413139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | - |
|---|
| Start bp | 336828 |
|---|
| End bp | 337655 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 645021858 |
|---|
| Product | putative methyltransferase |
|---|
| Protein accession | YP_003179313 |
|---|
| Protein GI | 257784096 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
|---|
| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.138997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.450836 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGCGCAC TACATGCACG TTTACCCAAA AACTTTGTTC TTGAGGAGCG CTTAAAGGCC
TATTCCAGCG TTATTGAGCC TCATCCAGAG AGTTTAAAAG GCATATGGGC TTCTGCATGT
GCGCCAATTA CTGCTGAGGG ACATGCCTTC TATTCTGAAG TTCGTGTAGA CCTTGGCTGT
GGTAAAGGGT CTTTTACTGC TGCTCAAGCT AAAGCAAATC CTGATGTCCT CTTTGTAGCC
ATTGATACAG AGCCTATCTG CATTTCATAT GCTGCAAAAA CAATTTATGA AGCAGGAATA
CCTAATGCTA TCGTGGTACC TGGTACTGGT ATGAAAATTG ATGAGTACTT CTCGCCAGAA
GAAATCTCTG TTATTTACCT TAACTTTCCC GCACCATTTC CTCGAATCAG ACAGGCAAAG
CTGCGCCTCA CCGATGCTGA GCGTCTTATG CAGTACAGAA ACGTTTTAAC TAAAGATGGC
GTTGTTCGTC TCAAAACAGA CAGCCAGCCA CTTTTTGATT TTTCTCTTGA GCAAGTTGAA
GTTGCTGGTT ACAACTTTAT TTGGAAAACG CGTGATGCTC AAGCAGATTT TCCTAATGAT
ATTCCTAGTG AATACGAAAA GAAACTTAGC GCCCAAGGAG CCAAAGTGCA TGCTTACCTG
ATTACTCCAG GTCCTATACC AGCAGATTTC ACACCTACAA AGCCTGTTAG TCTTGTTGAC
TACCTTCCAG AAGACTTAGA ATCGCTTACC TATGTTCCAC ACGGAATGGA AAGCACGGTT
CGCAATCTTG CAAACCGTGC CCGTAAACTT CGTAAAAAAT CGCAGTAA
|
|---|
| Protein sequence | MRALHARLPK NFVLEERLKA YSSVIEPHPE SLKGIWASAC APITAEGHAF YSEVRVDLGC
GKGSFTAAQA KANPDVLFVA IDTEPICISY AAKTIYEAGI PNAIVVPGTG MKIDEYFSPE
EISVIYLNFP APFPRIRQAK LRLTDAERLM QYRNVLTKDG VVRLKTDSQP LFDFSLEQVE
VAGYNFIWKT RDAQADFPND IPSEYEKKLS AQGAKVHAYL ITPGPIPADF TPTKPVSLVD
YLPEDLESLT YVPHGMESTV RNLANRARKL RKKSQ
|
|---|
| |