| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0285 |
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| Symbol | |
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| ID | 8413133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 325982 |
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| End bp | 326791 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645021852 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003179307 |
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| Protein GI | 257784090 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000546061 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCTA ATCTGCAAGA ACTAAAAAAG ACCTATTCGC GGCAGACGTA TAGTGTGTTT
TCAATAAACC GTCAGCAGAA GATTGCTGAC TCCCAAGTTA CTTTTTCGCT TGCCCATTCT
GTTTTCATCA TTCCTATTTT TGGAGCAGCT GAAATTACTA TTGGCGGCGA AGAGTTTATC
TGCGAAGGAA CCACCGTTGT ACACGCTCCC GCAGGTCAGA CCGTTTCTTA TCGCACACTT
TACGGGCGTT CTTTTGACCA CGTAAATATC TATTATGACG GCGTGCAGGA CGATGTCACT
AGTCCAATCT TCAATGCATA TGCATTCGAT CCTCAAGGGT TTGATCGCAT TCTTAATAAG
ACACTTGACC TAGAAAAACT TAATACCACC CCATCACTGG ACAATCGTGT TGCGCAGATT
GTCAATGGCA CCGAGCTTAT CAAATCAATG TTTCTGCTTA CCAACAGCCA AAAAGTCCAG
GAGAGTATGG CCGACGCTCG CACATATATC GAACTCCACT TTGCAAATCC AATTACCATT
CCCGACTTAG CCAAACGCTG CGGAATGAGT ACTCAGCGCT TCTCTAACAA TTTTGTCCAA
ACATTTGGCG TTCGCCCAAT GACGTTCATC ATTGCAAAGC GTCTTGATCA TGCTAAACAG
CTACTTCAGT CTGGTCTTTC TGTACGAGAG ACTTCCGAGG CAGTTGGTTA CAACGATCCG
TTCTACTTCA GCAGACTGTA CAAGAAACAC ATGGGCGTTA CACCTCAGGA TGTTCATGAC
CGCTATGAAG GAAATATTCT GATTAAGTAG
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| Protein sequence | MQANLQELKK TYSRQTYSVF SINRQQKIAD SQVTFSLAHS VFIIPIFGAA EITIGGEEFI
CEGTTVVHAP AGQTVSYRTL YGRSFDHVNI YYDGVQDDVT SPIFNAYAFD PQGFDRILNK
TLDLEKLNTT PSLDNRVAQI VNGTELIKSM FLLTNSQKVQ ESMADARTYI ELHFANPITI
PDLAKRCGMS TQRFSNNFVQ TFGVRPMTFI IAKRLDHAKQ LLQSGLSVRE TSEAVGYNDP
FYFSRLYKKH MGVTPQDVHD RYEGNILIK
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