| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0282 |
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| Symbol | |
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| ID | 8413130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 322719 |
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| End bp | 323759 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645021849 |
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| Product | periplasmic solute binding protein |
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| Protein accession | YP_003179304 |
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| Protein GI | 257784087 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000440667 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATC ACTGCACACA TCACTCAACA GCTGCAAATC TGCGCCCGCA TACAAACCTG
CAGCCACACG CTCACCGTAA CCCTCTCCTA ACCCGCAGAT CAGCGTTGTC TCTAATCGTC
GCAAGTTCCA CAATTGCCAT CGCTTCGCTC TCTGCTTGCG GGCAACGCAA TTCTGCAACC
AATTCAGGCT CTACATCAAA CCAGAACTCA TCGGCTCCCC TTGTCTTGAC TACCTTCACC
GTCATCCAAG ACATGGCTTC TCGCGTAGCA GGCGAGTTCT GCCAGGTAGA ATCCATCACA
AAGGCTGGCG CTGAAATTCA TGACTACGAG CCCACTCCCG ACGACCTCAA GCGAGCGCAG
AAAGCCCAGC TTATCCTCAA CAATGGCTTG GGGCTTGAGC GTTGGTTTGA GCGCTTTGTC
GACGAATCAC CTGCCCAACG TGCTGACCTC AGTGAGGGTA TTACCGCGAT TCCTATTGCC
GAGGGCGATT TCCAGGGTCA GGCCAATCCA CATGCGTGGA TGTCGCCTGA AAACGGCAAG
ATCTATGTCG AGAATATCGT CCGCGCGCTA AGCAGCCTTG TTCCTGACCA TGCCAAGGAC
TTTGAAGCCA ACGGCAACGC ATACAAAAAA GAACTCGACA GCATCTCTTC TCGACTAATC
GAAGAGCTCA GTGCCCTACC GGAAAACCAG CGCACGCTTG TGACTTGCGA GGGTGCGTTC
TCATATCTAT GTCGCGACAC CACCATGAAG GAGCTCTACC TCTGGGCAGT TAACGCCGCT
GATGAAGGTA CTCCACAGCA GATTGCCAAG GTCGTTGAAG CTGTAAAATC ACAGCAAATT
CCTGCGGTAT TCTGTGAATC CACGGTAAAC CCCAAGGCAA TGCAGCAGGT AGCTGACGAG
ACAGGCGCAA CCCTCAAAAC TGACGAGAAA AACATCTTGT ACGTTGACTC TCTTTCGGAA
GCCGGCGGTC CCGTTCCCAC TTATCTTGAT CTGCTTCAAC ACGATGCAGA CGCAATCGTA
TCTGGCCTCA TGGGAAGGTA A
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| Protein sequence | MKHHCTHHST AANLRPHTNL QPHAHRNPLL TRRSALSLIV ASSTIAIASL SACGQRNSAT
NSGSTSNQNS SAPLVLTTFT VIQDMASRVA GEFCQVESIT KAGAEIHDYE PTPDDLKRAQ
KAQLILNNGL GLERWFERFV DESPAQRADL SEGITAIPIA EGDFQGQANP HAWMSPENGK
IYVENIVRAL SSLVPDHAKD FEANGNAYKK ELDSISSRLI EELSALPENQ RTLVTCEGAF
SYLCRDTTMK ELYLWAVNAA DEGTPQQIAK VVEAVKSQQI PAVFCESTVN PKAMQQVADE
TGATLKTDEK NILYVDSLSE AGGPVPTYLD LLQHDADAIV SGLMGR
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