| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0264 |
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| Symbol | |
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| ID | 8413112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 303343 |
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| End bp | 304305 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645021831 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_003179286 |
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| Protein GI | 257784069 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.398879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.351019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCAGAAC TAGCCTACGT TTCCAGATCA ACTCACCTGA TGGGTGCAAC TATCACCATC
TCTTTATTAT CACCTCAAAA TGATATGCAG ATGGAATGCT CGGCAGAGCA GTTGCTTAAT
GGCGTCTTTG ACCTCCTGCA CATTTATAAC CAGCGATTTA GCGCAAACGA CGCAAATTCC
GAGCTCATGC AGGTCAACCA TGCAGCGGGC AAACATTCTA TTCCAGTTCA CCCCGAGTTG
TTTGAACTTA TTCAAATTGG AAAAGAACAA AGTCTCCTAC CTGCAAGTCA TTTAAATATT
GCCATTGGCC CTTTGGTTCA AGCCTGGCGA ATCGGCTTTA CTGACGCTCG CATTCCAAAC
AAAACCGAGA TTGCGCATGC GTTAGCGTTA ACTGACCCAC AACTCATTGA ATTAGATCCG
CTGAATTACA CTGTATTTCT TGCCAAAGAA GGCATGAAGC TAGACTTGGG ATGTCTGGCA
AAAGGTTACA TTGCCGACAA AATTGCAGAT TATCTGAAAA GTCAACACGT CACTTCCGCG
CTTATTAACC TTGGCGGTAA CATTAAAACA ATTGGTACCA ATTTACTTGC AGGCAGACCG
TGGCAGATTG GTATCCAGGA TCCGCAACAA CCAAGAGGCA CCAACCTTGC TGTGCTGCCT
ATTCGCAACC AGTCCGTAGT GACCTCCGGT ACCTACGAAA GGAAACTTCA GGTAAGCGGA
CAGTCTTACC ACCACATTCT TGACCGAGAT ACCGGCTATC CAGTTGACAC GCAACTTGCA
AGCATCACGA TTATCTCGGA CAACTCGCTT GACGGAGAAA TTTGGACAAC GCGCCTTTAT
GGCGAGAAAC CCAATCAACT TCTTGCCCGC GTAGAACAAG AAAAGGACAT CGATGCACTT
ATCGTAACTA ATGATAATCG CGTATATTAT TCGTCGGGAA TCTCACCTGA GCTCCTTGCG
TAA
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| Protein sequence | MSELAYVSRS THLMGATITI SLLSPQNDMQ MECSAEQLLN GVFDLLHIYN QRFSANDANS
ELMQVNHAAG KHSIPVHPEL FELIQIGKEQ SLLPASHLNI AIGPLVQAWR IGFTDARIPN
KTEIAHALAL TDPQLIELDP LNYTVFLAKE GMKLDLGCLA KGYIADKIAD YLKSQHVTSA
LINLGGNIKT IGTNLLAGRP WQIGIQDPQQ PRGTNLAVLP IRNQSVVTSG TYERKLQVSG
QSYHHILDRD TGYPVDTQLA SITIISDNSL DGEIWTTRLY GEKPNQLLAR VEQEKDIDAL
IVTNDNRVYY SSGISPELLA
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