Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0248 |
Symbol | |
ID | 8413096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 290141 |
End bp | 290752 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 645021816 |
Product | SirA family protein |
Protein accession | YP_003179271 |
Protein GI | 257784054 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0425] Predicted redox protein, regulator of disulfide bond formation |
TIGRFAM ID | [TIGR03527] selenium metabolism protein YedF |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.322 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTG ATGCTCGAAA TTTAACGTGT CCAAAGCCAG TTATTTTAAC GCTTGAGGCT CTCCCTAAGC TTTCTTCTGG AGAAAAACTT GATGTCGTTA TTAACGATAA TGTTGCTTTT GGAAATCTTA CCCGCCTTGC TGATGAGAAG AACTGTGATT TGACTTCTGT AAAGAATGGT TCAGATACAA CAATGACTTT TAGCCCTCGT AATAAAGTTG AAGCTAGTGA TTCAGCAGTT GTTGAGGCTT CTCAGTTTTG TGATATCCCA GATCGTTCTG CAACCGTTGT TGCGGTTGAT GCTGAGTATA TGGGTCGCGG TAATGATGAG CTCGGTCATA TTTTAATGAA GGGTCTTATC TACGCTCTTG CACATCAGGA TACGGTTCCT GAAACTATGT TGTTTTACAA CGGTGGTGCT CATCTGACCT GTGAAGGTTC AGAGTCACTC GAAGATATAA AGGAGCTTGA GTCTCGTGGT ACCAAGATTT TAACGTGTGG TACCTGCCTT GATTTCTATG GCATTAAAGA CAAACTTGCA GTAGGTGATG TCACCAATCT ATATGCAATT GCAGAGATTA TTTCACAACA GCCGGGCGTG ATGGTGCTCT AA
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Protein sequence | MKIDARNLTC PKPVILTLEA LPKLSSGEKL DVVINDNVAF GNLTRLADEK NCDLTSVKNG SDTTMTFSPR NKVEASDSAV VEASQFCDIP DRSATVVAVD AEYMGRGNDE LGHILMKGLI YALAHQDTVP ETMLFYNGGA HLTCEGSESL EDIKELESRG TKILTCGTCL DFYGIKDKLA VGDVTNLYAI AEIISQQPGV MVL
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