| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0245 |
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| Symbol | |
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| ID | 8413093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 288145 |
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| End bp | 288525 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645021813 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_003179268 |
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| Protein GI | 257784051 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.836469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.336264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAAGA AAGCTATCGT TACTGATAAG GCTCCAGCTG CAGTAGGTCC TTACTCTGCT
GCTGTTTCTG CAAACGGTTC CATTAACGTG TCTGGTCAGC TTCCTGTTGA TCCTGCAACT
GGTGAATTTG CAGGTGAGGA TATTAAGTCT CAGACCCGTC AGAGTCTAAC TAACATTAAA
AATATCCTCG AGGCAGCGGG TGCTTCCATG GCTGACGTTG TTGAGACTAC GGTTTTGCTT
TCCGATATCA ATGAGTTTGG TGCAATGAAC GAGGTTTATG CTGAGTTCTT TGCAGATCCT
TATCCAGCAC GTGCGGCATT CCAGGTGGTT GCACTTCCAA AGGGTGCAAA GGTTGAGATT
AAGGCCGTTG CTCGTATCTA G
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| Protein sequence | MSKKAIVTDK APAAVGPYSA AVSANGSINV SGQLPVDPAT GEFAGEDIKS QTRQSLTNIK
NILEAAGASM ADVVETTVLL SDINEFGAMN EVYAEFFADP YPARAAFQVV ALPKGAKVEI
KAVARI
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