Gene Apar_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0243 
Symbol 
ID8413091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp286047 
End bp286697 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content43% 
IMG OID645021811 
ProductMobA-like protein 
Protein accessionYP_003179266 
Protein GI257784049 
COG category[R] General function prediction only 
COG ID[COG2068] Uncharacterized MobA-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00192406 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.367058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACACA TTGGGTGTAT AGTCATGGCC TCCGGTGCTT CTACTCGCTT TGGATCCAAT 
AAGCTTATGG CATCGTTTAT GGGCAAGCCA CTGATTCAAC ATGTTATAGA AACGGCTCAA
ACAGCAGGAC TAGAGCCTAT AGTGGTAACA ATTGACAATC CGTTTCATGA ACCTATTCTT
GTACTGTGTA ATAAGCTCAA GGTTCGCGCT GTAACACACT CAGGTACCCT TCAAAGTGAC
ACAGTACGTC GAGCAATGCT TGAGGTACAA AAAGATGGTC TTGGTGAGAA CTCATGGGAT
GGCGCCATGT TTTTACAGGG AGATCAACCG TGTGTACGTG CAGATAGTTT ATGTGCTCTT
ATAGCTAGTT TTGAAGAACA TCCAAAAGTG GTTTCTCGCT TATCTTGGCA TGGAGTACCA
GGTAGCCCCA TAGTTTTTCC AAGCGTATTG TTTGATATGT TGTGCAGAGT ACAAGGCGAT
AAGGGCGGTT CTGGAGTATT TTTATTATGT CCTGAGTACC AAGCTTCCGC TGTACTTGTA
GAGGCACAAT GCGAACAAGA ACTTTTAGAT GTAGATACTC CGTCTGATTT GAATTACTTA
CATTCGGTAT CTATAAGCGG TTTGACGACC GAGAGATTGG GAGTTGACTG A
 
Protein sequence
MSHIGCIVMA SGASTRFGSN KLMASFMGKP LIQHVIETAQ TAGLEPIVVT IDNPFHEPIL 
VLCNKLKVRA VTHSGTLQSD TVRRAMLEVQ KDGLGENSWD GAMFLQGDQP CVRADSLCAL
IASFEEHPKV VSRLSWHGVP GSPIVFPSVL FDMLCRVQGD KGGSGVFLLC PEYQASAVLV
EAQCEQELLD VDTPSDLNYL HSVSISGLTT ERLGVD