Gene Apar_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0242 
Symbol 
ID8413090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp285038 
End bp285979 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content44% 
IMG OID645021810 
Productcarbamate kinase 
Protein accessionYP_003179265 
Protein GI257784048 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0549] Carbamate kinase 
TIGRFAM ID[TIGR00746] carbamate kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000109106 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.377226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAGC GTATTGTAAT TGCTTTGGGT GGTAATGCCC TTGGCAAAAA TTTACCTGAG 
CAGATGATTG CAGTAAAGCA TACTGCTAAG GCAATTGTTG ATTTAATTGA GCAAGGTAAT
GAAGTTATTA TCGCCCACGG TAATGGCCCA CAAGTTGGCA TGATCCAAGA GGCTATGACC
CAGCTTAATC GCTCTGATCC AGAGAAATAT ATTCCTTGCC CACTTTCTGT ATGTGTTGCC
ATGAGCCAGG GATATATTGG CTACGATCTT CAGAATGCGC TTCGTGAAGA GATGCTTAAC
CGCGGCATTA AGAAAAATGC AGCTACGGTT CTTACTCAAG TTGAAGTTGA TAAGAATGAT
CCAGCATTTA AGAATCCTAC TAAGCCCATT GGTTCTTTTA TGACAGAAGA AGAAGCCAAA
AAGATGGTAG CTGAGCGTGG ATATAACATT GTTGAGGACG CTGGTCGAGG ATACCGTCGT
GTAGTTGCAT CTCCTCAGCC TGTTGCTATT GTTGAGCTTG ATACCATTCG TTCACTTATT
GAGACGGGCA ATGTCGTTAT TGCTTGTGGT GGTGGCGGTA TTCCAGTATT TATTACTGAA
GGCAATCATC TTAAGGGTGC TGCAGCTGTT ATTGATAAGG ATTTTGCAGC AGCTCGTCTT
GCAGAGCAGG TTAATGCGGA TGCACTCATT ATTTTAACGG CTGTCGAGAA GGTCGCTATT
CATTTTGGTA CCCCTGAACA GGAAGACCTC TCTGAGCTTA CACCTGAGAG TGCACAAGCT
TATATTGAAG CCGGAGAATT TGCTCCTGGC TCTATGTTAC CTAAGGTACA GGCTGCTTTG
CAGTTTGCAC AGTCTGGCGA AGGACGTACA TCACTTATTA CTTTGCTGGA TAAGGCTGCT
GATGGAATTG CTGGAAAAAC CGGTACTGTG ATACGCGGAT AG
 
Protein sequence
MGKRIVIALG GNALGKNLPE QMIAVKHTAK AIVDLIEQGN EVIIAHGNGP QVGMIQEAMT 
QLNRSDPEKY IPCPLSVCVA MSQGYIGYDL QNALREEMLN RGIKKNAATV LTQVEVDKND
PAFKNPTKPI GSFMTEEEAK KMVAERGYNI VEDAGRGYRR VVASPQPVAI VELDTIRSLI
ETGNVVIACG GGGIPVFITE GNHLKGAAAV IDKDFAAARL AEQVNADALI ILTAVEKVAI
HFGTPEQEDL SELTPESAQA YIEAGEFAPG SMLPKVQAAL QFAQSGEGRT SLITLLDKAA
DGIAGKTGTV IRG