| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0236 |
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| Symbol | |
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| ID | 8413084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 273176 |
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| End bp | 274531 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645021804 |
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| Product | putative chlorohydrolase/aminohydrolase |
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| Protein accession | YP_003179259 |
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| Protein GI | 257784042 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | [TIGR03314] putative selenium metabolism protein SsnA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTTA TTGTGAACGG TCGTGTTATT ACGCGCGACG AAGCTCATCC GTACATTGAA
GATGGTGCCG TAGCAATTGA AGGTCAGAAG ATTGTTGCCG TTGATACGCG TGCGAAACTT
GAAGCCGCCT ATCCCGATGC AGAAAAGCTT GACGCGCATG GCGGCGTCAT TATGCCAGGT
CTTATCAACT GCCATACTCA TATCTATTCT GGCTTGGCAC GTGGTCTTGC TATCAAAGAC
TGTAACCCTC ACAACTTCCT TGAAAATCTT GAGCAGCAGT GGTGGAACAT CGACCGTCAT
TTGACGCTTG ATGGAACTCG CGCTTGCGCT TACGCAACTA TCCTTGATTC ACTGCGAGAT
GGTGTTACTA CTATCTTTGA CCACCATGCA AGTTTCTGCG AGATTCCTGA TTCACTTTTT
GCTATCAAAG ACGTCGCAAA AGAGCTTGGT ATTCGTGCTT GCCTTTGCTA TGAGACATCT
GATCGTGATG GAGAGGCCAA GCGTGATGAG TCTATCGCTG AAAATGCTGC CTTTGCTAAA
TGGGCTGCAG ATGAAGATGA CGATATGATT GCTGCTATGT TTGGTGGACA CGCCCTCTTC
ACACTTTCCG ATGAGACGCT TGATAAGATG GTTGAGGCCA ACAACGGTCT TACTGGTTTC
CATATTCACG TTTGCGAGGG CATGGATGAT GTGTATGATT CCGCCCTTAA TCACGGAACC
ACTGCGGTAC ATCGCCTGCT TGATCATGGT CTTTTGGGCG AGAAAACCAT GCTTGGTCAC
TGCATCCACG TGACTCCTGC TGATATGGAC ATTCTTGCTC ATACTCATAC CAGTATTGTC
AACAATCCTG AGTCCAATAT GGGTAATGCT GTTGGGTGTG CACCGGTGCT TGAGTTCTTC
AAGCGCGGTA TTGACGTATG CATGGGCACC GATGCATATA CGCACGATAT GCTTGAATCG
CTTAAGGTCT TTTTACCTAT GCAGCGTCAT AACGCTTGCA TGCCAAATGT TGGTTGGGTT
GAAGCTATGA CCATGCTCTT CAAGAACAAT GTCAAGATGG CCGAGAAGTA CTTCTCAACA
AAGTCCAACG GCAAGCCTTT GGGTAAGCTC GCACCTGGTG CTGCTGCTGA CATTGCAATC
TTTGATTACA AGCCATTCAC GCCGTTCTCT GACGAGAACA TCGACGGTCA CATGCTTTTT
GGTTTTGAGG GCAAGAACTG CCGTACTACT ATTGTCAACG GTAAGGTTCT CTATAAGGAC
CGCGAATTTG TTGCGTTTGA TGAGGACAAG ATTAATGCTT GGACTATGGT TGAGGCCAAG
AAGCTTTGGG GAGAGCTCAA CGGCCGCCAG TATTAA
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| Protein sequence | MLLIVNGRVI TRDEAHPYIE DGAVAIEGQK IVAVDTRAKL EAAYPDAEKL DAHGGVIMPG
LINCHTHIYS GLARGLAIKD CNPHNFLENL EQQWWNIDRH LTLDGTRACA YATILDSLRD
GVTTIFDHHA SFCEIPDSLF AIKDVAKELG IRACLCYETS DRDGEAKRDE SIAENAAFAK
WAADEDDDMI AAMFGGHALF TLSDETLDKM VEANNGLTGF HIHVCEGMDD VYDSALNHGT
TAVHRLLDHG LLGEKTMLGH CIHVTPADMD ILAHTHTSIV NNPESNMGNA VGCAPVLEFF
KRGIDVCMGT DAYTHDMLES LKVFLPMQRH NACMPNVGWV EAMTMLFKNN VKMAEKYFST
KSNGKPLGKL APGAAADIAI FDYKPFTPFS DENIDGHMLF GFEGKNCRTT IVNGKVLYKD
REFVAFDEDK INAWTMVEAK KLWGELNGRQ Y
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