Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0234 |
Symbol | |
ID | 8413082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 270610 |
End bp | 272073 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645021802 |
Product | uracil-xanthine permease |
Protein accession | YP_003179257 |
Protein GI | 257784040 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.72868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGATT CAAAGAAATC CATTTTGTTT CAATGGGATG GGGTACCGTC TGTTGGCGAG CTTATTCCAC TTTCATTACA GCATGTAGTT GCAGCTGTAG TGGGCATCAT TACACCTGCA ATTATTATTG CGGGTGTTTG CAACCTTGCG CCAGCGGATA AAACACTGCT TATTCAAGTT TCGTTAGTAA TGTCTGGATT AGTTACTATT TTGCAGGCAT ATCCACTCTT CGGCAAGTTT GGTGCAGGGT TACCGATAAT TATGGGCACA AGTTTTGCCT ACGTACCTAC CTTGCAAGCT ATTGGCGCCG CTAATGGAAT TGGGGCCATT CTTGGAGCTG AACTTATCGG TGGTATCGTT GCTGTTTTGT TTGGTTTCTT CTTTAAGAAG ATTCGTGTGT TATTCCCTAA TGTTGTAACA GGTACCGTAG TACTTTGCAT TGGTCTTTCT CTATATAGCG TTGCTATTGG ATATATGGCC GGTGGTAAGA GCTCAGCAAA CTTTGGTGCT CCTCAAAACT GGATTGTTGC TCTTATTACT CTTGCTGCAT GTATTTACTT CAGTAATTTT GCTAAAGGTG TTTTCAAGCT CGGATCTTTA CTTTTTGGCA TGCTCGTAGG TTATGTTGTT TCCATTCCTT TTGGCATGAT TAACTACGAG TCTGTAGTCA ATGCTTCTTG GGTTGAGCTT CCTCACTTTA TGCCTTTTGC TCTTGAATTT GTTCCAGCAA CAATTGCTTC GGTAACTATT GTCTTTATTG TTGCTGCACT TGAGGCTGTT GGTAACATGA CTGGTGCAAC GGTAGGCGGT ATGGATCGTG AACCCACCGA TACAGAGCTT ACTGGTGGTC TTGTTTCTCA GGGTGTTATG ACTATGGTTG GTGCTTTCTT TGGAGCATTC CCAACTTCAA CATATGGTCA AAATGTTGGT ATCGTGACAC AAACTCGTGT TATTAATCGT CGTGTTTTTG CGGTTGCAGG TGCAATCCTT TTGGTAGCCG GTTTGGCTCC AAAGTTAGCG GCAATTCTTT CAGGCATTCC TCAGCCTGTT ATTGGCGGAG CTACTATTAA CGTATTCGGT ACTATTTCAA TGACTGGTAT TCGTATTCTT TCTAAAGATG GTCTTACTCC TCGTAGAGCA ACTATCGCAG GTTTGTCTCT TGCGTTAGGT ATGGGTATTA CCATGACGTC TAACTCTCTT GCAGGTCCTG GAATGCCTGC GTTTATTAAT GAGGTATTTG GACATTCTGC TATTGTTGTT GCAGCGCTTT CTGCCATTAT TCTTAATCTT GTTCTTCCTA AGGGTGGACC TGATAAGGAA GTTGTTGAAG CGGTTGAGGG AGCTGCAGAA GTACAGGAAG AAGCAGTTGG AGCATTGTAT AAATCAGCTG CGACAGGTGT ACCTGCAGTT GAGCATAAGC CAGGTTCTGT TAAGGCGTAT AAAACAGGCT ATAAGTCTGA GTAG
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Protein sequence | MADSKKSILF QWDGVPSVGE LIPLSLQHVV AAVVGIITPA IIIAGVCNLA PADKTLLIQV SLVMSGLVTI LQAYPLFGKF GAGLPIIMGT SFAYVPTLQA IGAANGIGAI LGAELIGGIV AVLFGFFFKK IRVLFPNVVT GTVVLCIGLS LYSVAIGYMA GGKSSANFGA PQNWIVALIT LAACIYFSNF AKGVFKLGSL LFGMLVGYVV SIPFGMINYE SVVNASWVEL PHFMPFALEF VPATIASVTI VFIVAALEAV GNMTGATVGG MDREPTDTEL TGGLVSQGVM TMVGAFFGAF PTSTYGQNVG IVTQTRVINR RVFAVAGAIL LVAGLAPKLA AILSGIPQPV IGGATINVFG TISMTGIRIL SKDGLTPRRA TIAGLSLALG MGITMTSNSL AGPGMPAFIN EVFGHSAIVV AALSAIILNL VLPKGGPDKE VVEAVEGAAE VQEEAVGALY KSAATGVPAV EHKPGSVKAY KTGYKSE
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