| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0233 |
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| Symbol | |
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| ID | 8413081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 269150 |
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| End bp | 270412 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645021801 |
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| Product | peptidase M20 |
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| Protein accession | YP_003179256 |
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| Protein GI | 257784039 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.571831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAGCA GAACTAATTT TGACGCATCC AAACTTCCTA ACAACCTACC AGAAGTTGCA
AAAATGACAG CACAACTTGT TGCTCTTAAA AGTACTGATC CTGGTTCTTA TGAAGAAGAG
ATTGAAACAT TTATTAAAAC GTGGATTGTT AACTCGTGTT CTTTTTCACT GCCCAATAAA
AAAGAGATGT TTCCTATCAT CCAAGAAGTT GAAGTTTTTC CTCATAGACG TTGCCTTAGG
GCAACAATCC CCAGTGCTAC CACATCATTT GATTCCTCTA CACTCCCCCC ATCAGACCTG
ACATTTATCT GCCATATGGA TACCGTAACT GATGGCGATG GCTGGGACTC TGAAACACCT
GCATTCAATC CCGTATATAA AGATGGGCTG CTGTATGGAC GAGGCTCATG TGATATGAAA
GGGGGGCTTG CCTGTGCACT TCTCGCCTTT AGAGACGCTT GTCAGACATG CAAGACACAA
AAGACACTTC CACAAAAATC TCTTTCTGTC ATCTTCACAG TTGACGAAGA AGCTAATATG
CGCGGCGTTG AACGTGTTAT AGACGCTGGT TGGGTTGGCG AGAAAGGCTG GGTACTTGAC
GCTGAGCCTA CAAACAACGC CATCCGTGGA TCTCACAAAG GTCGAACCTG GTTCAAAATT
ACTGTTACCG GAATCACAGC TCACGCAAGC ACCCCTTGGA AAGGTGCTGA TGCTATCGCT
GCAATGGCAA TTGTTATAAA TGAGATACGA ACTGCAGTGC AGAGCCTACC CACTCATCCA
GAGCTTGGAT CATCAACGGT AACCTTTGGG CAGATTTTGG GTGGGTATCA ACCGTACGTT
GTTCCTGATA AAGCCGAACT CTGGGTTGAC ATGCGCTTAG CACCCCCTAC AACAACGCAA
GCTGCAGAGC GTATAGTGCA ACAAGCAATC AAGCGAGCCC AAACAGAGAT TTGCGGTACT
CACGCCAGCT ATGACATTAC GGGAAATAGG CCTTCCGTTG TCCTTCCCAA GGATTCAGAA
CTTCTCGCAC AGCTTCTCTC GTGTGCAGAA TCTTGCAATA CGCCTGCAAA GCTCGATATT
TTTACTGGAT ATACCGATAC CGCTGTAATT GCATCCACCT GCAGAAATAC AGAATGTATG
TCATATGGAC CTGGAGAACT TGAACGTGCT CATAAACCAA ATGAGTACGT TCCTGTAGAA
GATTTAACAC GCGTATATCG TGTATTTAAA TCACTGATAA AAAGTACCAT ATGCGACTTT
TAA
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| Protein sequence | MSSRTNFDAS KLPNNLPEVA KMTAQLVALK STDPGSYEEE IETFIKTWIV NSCSFSLPNK
KEMFPIIQEV EVFPHRRCLR ATIPSATTSF DSSTLPPSDL TFICHMDTVT DGDGWDSETP
AFNPVYKDGL LYGRGSCDMK GGLACALLAF RDACQTCKTQ KTLPQKSLSV IFTVDEEANM
RGVERVIDAG WVGEKGWVLD AEPTNNAIRG SHKGRTWFKI TVTGITAHAS TPWKGADAIA
AMAIVINEIR TAVQSLPTHP ELGSSTVTFG QILGGYQPYV VPDKAELWVD MRLAPPTTTQ
AAERIVQQAI KRAQTEICGT HASYDITGNR PSVVLPKDSE LLAQLLSCAE SCNTPAKLDI
FTGYTDTAVI ASTCRNTECM SYGPGELERA HKPNEYVPVE DLTRVYRVFK SLIKSTICDF
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