| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0224 |
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| Symbol | |
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| ID | 8413072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 261742 |
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| End bp | 262245 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 645021792 |
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| Product | transcriptional regulator, BadM/Rrf2 family |
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| Protein accession | YP_003179247 |
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| Protein GI | 257784030 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.997359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTCT CTATTGGTAT AGAATACGCA CTTCATTGTT TACTATACAT GGTTGATTTA
AATGAAAATA AAAGTATTCG TGTACGTGAT TTTGCTGAAT TTCAAGGTAT TTCTGAAAGT
TATTTATCCA AGACTTTTAC CCAACTTTCT AAAGCCGGTA TTGTTCTTTC GTCTCCTGGA
ATAAAGGGTG GCTATCGTCT TGCCAAATCT CCTCAGTCTA TTTCTTTTTG GGACATTGTT
GAAGCAATTG AAGGAAAAGA TCCTCTGTTC CAATGTCATG AAATCAGATT ATCTAATTCA
ACTCTCAAAG AAATCGGCGT CCTTCAAAAA GCTGATAAAA GCCCTTGTCT TATAAGCGGA
GTTATGCACC AGGGAGAAAA AGAAATGAAA AAATTTCTTT CAAAAAAGAC ATTACGCTGG
CTCCACGATG AGGTGTTCAA CCACGCATTT ACCAAAGAGC AACAAAAACT TACTATCCAA
TGGCTTGTTC ATCATAGTTG GTGA
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| Protein sequence | MKFSIGIEYA LHCLLYMVDL NENKSIRVRD FAEFQGISES YLSKTFTQLS KAGIVLSSPG
IKGGYRLAKS PQSISFWDIV EAIEGKDPLF QCHEIRLSNS TLKEIGVLQK ADKSPCLISG
VMHQGEKEMK KFLSKKTLRW LHDEVFNHAF TKEQQKLTIQ WLVHHSW
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