| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0221 |
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| Symbol | |
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| ID | 8413069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 259801 |
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| End bp | 260922 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 645021789 |
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| Product | protein of unknown function DUF1648 |
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| Protein accession | YP_003179244 |
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| Protein GI | 257784027 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4194] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.263537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.853287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCA TTTCAATTAG TGCACAGACA ATAGTAACGT TTGTAGTTGG ATTATTTCTT
ACTTTCATTC CGTATATAAC ACGCCATAAC GAGTGTTTTG CTGTGACGGT ACCAGTTTCT
GCTCAAAAAG ATTCACGTAT GATTTCTTTA AAGAAACGCT ATGTTGTGGA AATGCTTCTT
ACAACAATAC TAGCAACCAT TTCTTCTGTG ATAGCAGGGA AGTTACTAAC AACTAATCAA
ACTATAGCCG GCTTAACTCT TCTATATAGT GCTTTAGTGA TTCCTGCAAT TGTCTCTTTT
GTGTTAATGT TGCATGCCCG TTCTAAGGTA ATAGCCCTTA AGAAATCTGA AGGTTGGGAT
TTCGAGCAAC ATAAGATGAC TGCTAGTGTT GTCGAAAAAG ACTTCCCGAA TCCAATCTCT
TTAAGATGGA ACCTTATGTA TATTCCTATT ATTTTGGGAA CAGTTTGCTT GGGATTTGTT
CTTTATCCGA GTATGCCTGA TATGTTGCCT ATGCACGCCG ATTTCACAGG AACAATTGAT
AGCTACACGC CAAAAACGTT TGGTAGTGCC CTTGGATTTC CTGTTGCATT TGAAGTCTTC
ATGGCGGCAT GCTTTATCTT TTCTCATTGG ATGATTGTGC ATTCAAAACA TGCGGTTGAT
CCTAGTGAGC CAGCTACTTC TGCATTTTCA TATGGAGTTT TTGCTCGTGC TCAGAGCATA
TTTCTCTTCA TAATAGGCTT ACTTATAAGT GGCGGTCTTG GTGTTTTGTT TATTCTTGCA
TCAGCAGGGC GTATTAGTCT TGGACAAGTG GGATTTATCG CTGAAATTTT TGCTGTGCTT
ACCGTCGTTG GTATTTTGGT ACTTTCAGCT GTCTATGGTC AGTCAGGTTC ACGAGTATTT
AGGAAGTTAG ACCACAACGA GAACTACCTA TCAGATGAGG ATAGACATTG GAAACTTGGC
GTCTTTTATT TTAACCGTGA AGATGCAAGC ATCTTTTTAC CAAAACGATT TGGTGTTGGA
TGGACTATGA ACTTTGCACG ACCAGCTGTT TGGGTAATTA TCGTGGGTCT TATTATTTTT
CCTATAGTTT TTGTTGTACT TGTTTCTTAT TTGGCGGGGT AA
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| Protein sequence | MDIISISAQT IVTFVVGLFL TFIPYITRHN ECFAVTVPVS AQKDSRMISL KKRYVVEMLL
TTILATISSV IAGKLLTTNQ TIAGLTLLYS ALVIPAIVSF VLMLHARSKV IALKKSEGWD
FEQHKMTASV VEKDFPNPIS LRWNLMYIPI ILGTVCLGFV LYPSMPDMLP MHADFTGTID
SYTPKTFGSA LGFPVAFEVF MAACFIFSHW MIVHSKHAVD PSEPATSAFS YGVFARAQSI
FLFIIGLLIS GGLGVLFILA SAGRISLGQV GFIAEIFAVL TVVGILVLSA VYGQSGSRVF
RKLDHNENYL SDEDRHWKLG VFYFNREDAS IFLPKRFGVG WTMNFARPAV WVIIVGLIIF
PIVFVVLVSY LAG
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