Gene Apar_0214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0214 
Symbol 
ID8413062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp254105 
End bp254572 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content37% 
IMG OID645021782 
Productputative flavodoxin 
Protein accessionYP_003179237 
Protein GI257784020 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.448936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTC TGATTGTCTA TTACTCTTAC TCAGGCATAA CAAGAAAACT TGCAGAAGAT 
ATTGCACTTA TTACAGACGG AGAGTTACTA GAGCTTAAAC CTCAAGACCC ATATTCCTTT
TCATATAACA CAGCAATAAA AGAAGTAAGA AGCCAAATAG AGAAGGGCTA TGGTCCTCAA
CTGTGCCAGA GCTCAGTAAA CATTGATGAT TTTGAAACAA TCTTTATTGG TTCTCCAAAC
TGGCTCAAAA CCTTTGCTCC ACCTGTTCTT TCATTTCTAA GAACAACAGA TTTAAGCAAA
AAGACAGTTA TTCCATTCTG CACACATGGT GGCGGAGGAT TTGGTCATAT GCTTGAAGAC
TATGAAAGAG AATGTAACGC ATCTACCATA AAGAAAGGAA TTGCCCTCAA GGGTGATTAC
GACTTTAACA AGTTACGAAA TTGGTTAGAA ACATCAGATT TATATTAA
 
Protein sequence
MKPLIVYYSY SGITRKLAED IALITDGELL ELKPQDPYSF SYNTAIKEVR SQIEKGYGPQ 
LCQSSVNIDD FETIFIGSPN WLKTFAPPVL SFLRTTDLSK KTVIPFCTHG GGGFGHMLED
YERECNASTI KKGIALKGDY DFNKLRNWLE TSDLY