Gene Apar_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0194 
Symbol 
ID8413042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp230772 
End bp231335 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content64% 
IMG OID645021764 
Producthypothetical protein 
Protein accessionYP_003179219 
Protein GI257784002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00375729 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGCATAG CCAGCGCCCT GGGAGCCGAA GCTCCCAGGG ATGCCCTGCG CTTAGAGCGT 
GCCGAGCGCG TTGAGGTGGT GACGGAGAAG CGCCCGACTC TCGCCGACGA TGAACATGCT
CACAACGTCG AACCTAATCC GGATTTCCTC GGAGTCCAGG TGCTCGACGA GGTAGGCAGC
CGCGAGCCGT TCGAGCGCCG CGCGGTCCGC GTCCTCCTCG GGAAATCCCT CGCCGCCGTT
CTGTGCGACC TGGCAGTGGA CGAAGACCAG GTCGTCCTCG TCACGGGCGA TGAAGTCGAC
GACGTCGCCG CCGACTCCAT ACGCAAGATA GGCGTAAGCG GCGCGAGGGG TACTCTCGAG
GTCCTATTCC GCTACGAGAG GGAGCTGAGC CTCATACCCG TCGTCACCGA AGACGGGGTG
GCCATAGCGC CCGATCCCAA GAAGGAAGGC TCGCAGAAGG CCGTGCAGAC CCTCAAGGCA
TGGAAACGCA TGAGGGACCA GCTTGCATCG GGCGAGATAG ACGAGGGCGA CTACGAGTCC
TGGAAGGCCC GTTTCATGGG CTAG
 
Protein sequence
MSIASALGAE APRDALRLER AERVEVVTEK RPTLADDEHA HNVEPNPDFL GVQVLDEVGS 
REPFERRAVR VLLGKSLAAV LCDLAVDEDQ VVLVTGDEVD DVAADSIRKI GVSGARGTLE
VLFRYERELS LIPVVTEDGV AIAPDPKKEG SQKAVQTLKA WKRMRDQLAS GEIDEGDYES
WKARFMG