Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0194 |
Symbol | |
ID | 8413042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 230772 |
End bp | 231335 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645021764 |
Product | hypothetical protein |
Protein accession | YP_003179219 |
Protein GI | 257784002 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00375729 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAGCATAG CCAGCGCCCT GGGAGCCGAA GCTCCCAGGG ATGCCCTGCG CTTAGAGCGT GCCGAGCGCG TTGAGGTGGT GACGGAGAAG CGCCCGACTC TCGCCGACGA TGAACATGCT CACAACGTCG AACCTAATCC GGATTTCCTC GGAGTCCAGG TGCTCGACGA GGTAGGCAGC CGCGAGCCGT TCGAGCGCCG CGCGGTCCGC GTCCTCCTCG GGAAATCCCT CGCCGCCGTT CTGTGCGACC TGGCAGTGGA CGAAGACCAG GTCGTCCTCG TCACGGGCGA TGAAGTCGAC GACGTCGCCG CCGACTCCAT ACGCAAGATA GGCGTAAGCG GCGCGAGGGG TACTCTCGAG GTCCTATTCC GCTACGAGAG GGAGCTGAGC CTCATACCCG TCGTCACCGA AGACGGGGTG GCCATAGCGC CCGATCCCAA GAAGGAAGGC TCGCAGAAGG CCGTGCAGAC CCTCAAGGCA TGGAAACGCA TGAGGGACCA GCTTGCATCG GGCGAGATAG ACGAGGGCGA CTACGAGTCC TGGAAGGCCC GTTTCATGGG CTAG
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Protein sequence | MSIASALGAE APRDALRLER AERVEVVTEK RPTLADDEHA HNVEPNPDFL GVQVLDEVGS REPFERRAVR VLLGKSLAAV LCDLAVDEDQ VVLVTGDEVD DVAADSIRKI GVSGARGTLE VLFRYERELS LIPVVTEDGV AIAPDPKKEG SQKAVQTLKA WKRMRDQLAS GEIDEGDYES WKARFMG
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