| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0184 |
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| Symbol | |
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| ID | 8413032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 215060 |
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| End bp | 216697 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645021756 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_003179211 |
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| Protein GI | 257783994 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAG ATATCGATTT TGGCACCGAC GCTCGTGCCA AGCTTGCTAA GGGCGTAAAC
ACCCTGGCAG ATGCCGTAAC CACCACCCTT GGACCTAAGG GTCGCTACGT TGCACTGCAG
CGTTCTTATG GTGCACCAAC TATTACCAAC GACGGCGTTT CCGTTGCTCG CGAGATTGAG
CTTAAGGACC CAGTAGAGAA CATGGGTGCA CAGCTGGTCA AAGAGGTTGC AACCAAGACT
AACGATACTG TCGGTGATGG TACCACCACC GCAACCTTGC TTGCACAGGT TATTGTTAAC
GAGGGTCTTC GTAATGTTGC AGCTGGTGCA AATCCAATTG CAATTCGCCG CGGCATCGAC
AAGGCTGTTG AGGCTGTTGT CTCCCAGATG AAGGGTATTG CTAAGGAGGT CTCAACCAAG
CAGCAGATTG CTTCCGTTGG TACCATTTCT GCAGGTGACC CTGTCATTGG TGGCAAGATT
TCAGATGCTA TGGACGTTGT CGGCAAGGAT GGCGTCATTA CTGTTGAGGA GTCTCAGACC
TTTGGTATTG ACATCGACAC CGTTGAGGGT ATGCAGTTTG ACAAGGGCTA TGTTTCCCCT
TACTTCGCAA CCAACAACGA GACTCTCACC GCTGAGCTGG ACAATCCTTA CATTCTGATG
ACCGATAGCA AGATCTCCTC CATCCAGGAC ATCCTGCCTA TCCTTGAGGC TGTCCAGAAG
CAGGGCGCAC CTCTGCTCAT CATGGCTGAG GACGTTGACG GCGAGGCTTT GACCACCCTC
ATCCTTAACA AGCTTCGTGG CGTTCTGAAC GTCTGCGCAA TTAAGGCTCC TGCATACGGC
GACCGTCGTA AGCGTATGCT TGAGGACATT GCTGTTCTCA CTGGTGGTCA GGCAGTCATC
AAGGAGCTCG GTGTTAACCT CAATGAGATT ACCGCTGACA TGCTCGGCCG CGCTAAGTCC
GTCAAGGTTA CCAAGGAGAC CACTACCATC GTTGGTGGCG CTGGTTCCAA GGACGCAATT
GACGAGCGTA TTGCTCAGAT TAAGGCTGAG ATTGACAACA CCACTTCTGA CTTTGATCGC
GAGAAGCTCC AGGAGCGTCT TGCTAAGCTT GCTGGCGGCG TTGCCGTTAT CAAGGTTGGT
GCAGCTACTG AGGTTGAGCT CAAGGAGATT AAGCACCGCA TCGAGGACGC ACTTCAGGCA
ACTCGCGCAG CTGTCGAGGA GGGTATTGTT GCAGGCGGCG GCGTTTCCTT CCTGGCTGCA
TCTTCTGTTT TGGATAGCGT TCAGACCTCT GATGCAGACG AGAAGATTGG TGTTGAAATC
ATCCGTAAGG CACTTGAGGC TCCAGTTCGC ACCATCGCTA ACAATGCTGG TTTCGAGGGC
AGCGTAGTTG TCGAGAAGAT CAAGGCACTC CCAGCAGGTC AGGGTCTTGA TTCTGCAACA
GGTCAGTATG GCGACATGAT TGAGATGGGC GTTCTTGACC CAGTTAAGGT CACCCGCACC
ACGCTTCAGA ATGCAGCTTC CGTTGCATCC CTCATCCTCA TCACTGAGGC AACTGTTTCC
GAGATGCCAA AGGACACCAC CATCGAGGAG TCCATTTCTC GTGCAGCTGC TCAGGGCGGC
CAGGGCGGCA TGTACTAA
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| Protein sequence | MAKDIDFGTD ARAKLAKGVN TLADAVTTTL GPKGRYVALQ RSYGAPTITN DGVSVAREIE
LKDPVENMGA QLVKEVATKT NDTVGDGTTT ATLLAQVIVN EGLRNVAAGA NPIAIRRGID
KAVEAVVSQM KGIAKEVSTK QQIASVGTIS AGDPVIGGKI SDAMDVVGKD GVITVEESQT
FGIDIDTVEG MQFDKGYVSP YFATNNETLT AELDNPYILM TDSKISSIQD ILPILEAVQK
QGAPLLIMAE DVDGEALTTL ILNKLRGVLN VCAIKAPAYG DRRKRMLEDI AVLTGGQAVI
KELGVNLNEI TADMLGRAKS VKVTKETTTI VGGAGSKDAI DERIAQIKAE IDNTTSDFDR
EKLQERLAKL AGGVAVIKVG AATEVELKEI KHRIEDALQA TRAAVEEGIV AGGGVSFLAA
SSVLDSVQTS DADEKIGVEI IRKALEAPVR TIANNAGFEG SVVVEKIKAL PAGQGLDSAT
GQYGDMIEMG VLDPVKVTRT TLQNAASVAS LILITEATVS EMPKDTTIEE SISRAAAQGG
QGGMY
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