Gene Apar_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0181 
Symbol 
ID8413029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp209902 
End bp212400 
Gene Length2499 bp 
Protein Length832 aa 
Translation table11 
GC content57% 
IMG OID645021753 
Productmetalloendopeptidase, glycoprotease family 
Protein accessionYP_003179208 
Protein GI257783991 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family
[TIGR01575] ribosomal-protein-alanine acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCTA TAAAAAATGA TACGAGCGTG GTGCTTGCGG TTGATACGTC AACGGACATG 
TTGGCGTGTA CGGTCGCGCG TCTGACCAAG CGCAATGCCG ACGCGGCGGT TGCGGCTGCG
GCAGACGGCG CAAGCGCGGC GGACGGTGGG TTCAACGTTG AGGTACTGGC GTCAACAGAT
CACCTGTGCC GCAGGCAGGC AAACGTGGAG CTTGTAAGCT CGGTCCAGGA AGCGCTTGTC
GCGGCTGACC TAACTATGGC TGACGTCGAT GCTGTTATCG CAGGTAGAGG ACCTGGTTCG
TTCACAGGTG TCCGTATTGG CGTGGCAACT GCAAAGGGCA TCTCCTGCGG TTCTGGCCTG
CCACTTTATG GCGCAAGCGC TCTTGATGCT ATGGCGTTTA GCGCGTGGAA GGTGGGCGTG
CGCGGCACCG TGGGTGTTGT TGCAGATGCC ATGCGCGGCG AGGTCTATCC GGGCATCTAC
CTGCTGGATG ACGCCGGAGC ACATAGAACG TTCCCGGTAG AGACCGTCTT CAAGGCAGAC
GCCTGTGTGG AGGAGTGGTC GAGCAGGACT GATAAGGACC AATTCACGCT CACAGGCAAT
GGTTTAGTGA AGTACCGTGA GCGTTTTGAG CGCGCGGGTT TCTCGACATA CACCGATGAA
GCAACGTGGT TCCCAACAGG AGAAGGCCTG GTACGCGCGG TGTGTATGCC CGAGTATCAG
CAGGCGGGCG CGGGCGATCC GGCGCTGGTG CTGCCCATTT ACACGCGACT TTCGGATGCG
GAGGAGTCGG AGCGCAAGCG TTTGGGTCTG AAGGAGCCTG CAACGGTGGC TCTGACCGGC
GTGGATGATG AGCTGGCTAA TATTCACCTG CAGCTTCGCC CGATGACAGT GAATGATCTT
GATCAGGTGG CGGAGCTTGA GGCAGCAACG TATGCCAAAG CTGCGCATTC TACCTGGTCA
AAGCAGATGT TTTATGACGA GCTTTCGGGT GTAGGTCGTA GTTGGTGGTT GGCTCACGAC
CGCGGAACGG TTATCGGTTT TGCGGGCGGT CGTCTGGCGG GAGCTCAGTT TGAGGTCGAA
GAAGTGGTGG TCACGCCCGA ACGTCGCCGC CAGGGCATTG CATCCAAGCT GGTAGAACGT
GTGGCGTACG ATGCTCAGAT GCTGGGCGCG TCTGCGATTA CCCTTGAGGT GGAGGAAGAT
AACGCTCCAG CTCAGGGTGC TTATAGCAAG CTGGGATTTA CTGAGGTTGG TCGTCGTCCG
GGGTATTACG GTTCGGATTG TGCAGCGCTA TTGATGACGG CGCAGTTGCC TCTGGCAGTT
GGCGCTGGCT TTGAAGCCAG GAATCCTGAG CCTCATACGT CAGTACGTCC ATGGCCTATT
GTTGCAGGTG AGCGCTCTGA AGAGACGCTT GCGGCACTGC GTGAGGCAGG GGATTTGATC
CTCAGTCTGG AGTCCTCCTG CGACGAGACT GCCATGTGCA TCATGGATTC ACACGGTGTG
GTCTGTGCAA ACGTTGTCGC AACTCAAATT GACTTCCACG CCCGTTTTGG TGGCGTCGTG
CCCGAGATTG CTTCTCGCAA GCATACCGAG GCTATTGTGG GTCTCTTTGA GGAGACCATG
GCCCGTGCGG GCGCTCATTT TGGATGCGAT ACGCTAGTGC CGTCTGACCT GGCTGCCGTT
GGTGTTACCG CAGGTCCTGG TCTTGTTGGT GCGCTCGTTG TGGGCGTGGC ATTTGCCAAG
GGCTTCTGCG TGGCTACTGA CCTGCCGCTT ATTCCCGTTC ATCACCTGGA AGGTCACCTG
CTGGCCAACC TGTTTGAGAC ACCAGACCTG GAGCCACCGT TTGTGGCAAG CTTGGTCTCA
GGTGGTAATA CTATGCTGGT ACACGTGCGT GCCTGGGGAG ATTACGTGGT TCTGGGTTCC
ACTATTGACG ACGCCGTGGG TGAGGCCTTT GATAAGGTTG CTAAGGCGCT TGGTCTGGGC
TATCCAGGTG GCCCTGTAAT CAGTAAACTT GCAGCTCAGG GTAACCCTAA GGCTATTCAT
TTCCCGCGTG CAATGATGCA CAGCGGCGAC TATTCCTTTA GTCTCTCGGG CCTAAAGACT
GCCGTTATCA CCTATATTGA AGGCGAGAAT CGCGCTGGTA GAGCTATCAA TCTGCCCGAC
TTGGCCGCTT CGTTTGAGCA GGCTGTTATT GACGTACAGG TTGCAAAGGC TAAAACTGCT
GTTGAGGAGA CAGGTGTCTC CGATTTTTGC GTGGGTGGTG GCGTTGCTGC AAACCCCGCA
CTTAGAGCTG CATATAAAGA AACCTTTGGT AAGATGGGCG TTCGAGTGAC AGTGCCTCCG
ATGTCGGTTT GCGGCGACAA TGCCGCAATG ATTGCCGTGG GTGCTCTTCG CAGTTATCGT
ACGCAGGGTT TCTCGCCATT GACCTTGGAT GCAAACCCCA ACGCGCAGCT GGGATTGTGG
TCGTCGGATG CGGCACCCGT TATCCCAAGC GGCATGTAA
 
Protein sequence
MLAIKNDTSV VLAVDTSTDM LACTVARLTK RNADAAVAAA ADGASAADGG FNVEVLASTD 
HLCRRQANVE LVSSVQEALV AADLTMADVD AVIAGRGPGS FTGVRIGVAT AKGISCGSGL
PLYGASALDA MAFSAWKVGV RGTVGVVADA MRGEVYPGIY LLDDAGAHRT FPVETVFKAD
ACVEEWSSRT DKDQFTLTGN GLVKYRERFE RAGFSTYTDE ATWFPTGEGL VRAVCMPEYQ
QAGAGDPALV LPIYTRLSDA EESERKRLGL KEPATVALTG VDDELANIHL QLRPMTVNDL
DQVAELEAAT YAKAAHSTWS KQMFYDELSG VGRSWWLAHD RGTVIGFAGG RLAGAQFEVE
EVVVTPERRR QGIASKLVER VAYDAQMLGA SAITLEVEED NAPAQGAYSK LGFTEVGRRP
GYYGSDCAAL LMTAQLPLAV GAGFEARNPE PHTSVRPWPI VAGERSEETL AALREAGDLI
LSLESSCDET AMCIMDSHGV VCANVVATQI DFHARFGGVV PEIASRKHTE AIVGLFEETM
ARAGAHFGCD TLVPSDLAAV GVTAGPGLVG ALVVGVAFAK GFCVATDLPL IPVHHLEGHL
LANLFETPDL EPPFVASLVS GGNTMLVHVR AWGDYVVLGS TIDDAVGEAF DKVAKALGLG
YPGGPVISKL AAQGNPKAIH FPRAMMHSGD YSFSLSGLKT AVITYIEGEN RAGRAINLPD
LAASFEQAVI DVQVAKAKTA VEETGVSDFC VGGGVAANPA LRAAYKETFG KMGVRVTVPP
MSVCGDNAAM IAVGALRSYR TQGFSPLTLD ANPNAQLGLW SSDAAPVIPS GM