Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0181 |
Symbol | |
ID | 8413029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 209902 |
End bp | 212400 |
Gene Length | 2499 bp |
Protein Length | 832 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645021753 |
Product | metalloendopeptidase, glycoprotease family |
Protein accession | YP_003179208 |
Protein GI | 257783991 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family [TIGR01575] ribosomal-protein-alanine acetyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTGCTA TAAAAAATGA TACGAGCGTG GTGCTTGCGG TTGATACGTC AACGGACATG TTGGCGTGTA CGGTCGCGCG TCTGACCAAG CGCAATGCCG ACGCGGCGGT TGCGGCTGCG GCAGACGGCG CAAGCGCGGC GGACGGTGGG TTCAACGTTG AGGTACTGGC GTCAACAGAT CACCTGTGCC GCAGGCAGGC AAACGTGGAG CTTGTAAGCT CGGTCCAGGA AGCGCTTGTC GCGGCTGACC TAACTATGGC TGACGTCGAT GCTGTTATCG CAGGTAGAGG ACCTGGTTCG TTCACAGGTG TCCGTATTGG CGTGGCAACT GCAAAGGGCA TCTCCTGCGG TTCTGGCCTG CCACTTTATG GCGCAAGCGC TCTTGATGCT ATGGCGTTTA GCGCGTGGAA GGTGGGCGTG CGCGGCACCG TGGGTGTTGT TGCAGATGCC ATGCGCGGCG AGGTCTATCC GGGCATCTAC CTGCTGGATG ACGCCGGAGC ACATAGAACG TTCCCGGTAG AGACCGTCTT CAAGGCAGAC GCCTGTGTGG AGGAGTGGTC GAGCAGGACT GATAAGGACC AATTCACGCT CACAGGCAAT GGTTTAGTGA AGTACCGTGA GCGTTTTGAG CGCGCGGGTT TCTCGACATA CACCGATGAA GCAACGTGGT TCCCAACAGG AGAAGGCCTG GTACGCGCGG TGTGTATGCC CGAGTATCAG CAGGCGGGCG CGGGCGATCC GGCGCTGGTG CTGCCCATTT ACACGCGACT TTCGGATGCG GAGGAGTCGG AGCGCAAGCG TTTGGGTCTG AAGGAGCCTG CAACGGTGGC TCTGACCGGC GTGGATGATG AGCTGGCTAA TATTCACCTG CAGCTTCGCC CGATGACAGT GAATGATCTT GATCAGGTGG CGGAGCTTGA GGCAGCAACG TATGCCAAAG CTGCGCATTC TACCTGGTCA AAGCAGATGT TTTATGACGA GCTTTCGGGT GTAGGTCGTA GTTGGTGGTT GGCTCACGAC CGCGGAACGG TTATCGGTTT TGCGGGCGGT CGTCTGGCGG GAGCTCAGTT TGAGGTCGAA GAAGTGGTGG TCACGCCCGA ACGTCGCCGC CAGGGCATTG CATCCAAGCT GGTAGAACGT GTGGCGTACG ATGCTCAGAT GCTGGGCGCG TCTGCGATTA CCCTTGAGGT GGAGGAAGAT AACGCTCCAG CTCAGGGTGC TTATAGCAAG CTGGGATTTA CTGAGGTTGG TCGTCGTCCG GGGTATTACG GTTCGGATTG TGCAGCGCTA TTGATGACGG CGCAGTTGCC TCTGGCAGTT GGCGCTGGCT TTGAAGCCAG GAATCCTGAG CCTCATACGT CAGTACGTCC ATGGCCTATT GTTGCAGGTG AGCGCTCTGA AGAGACGCTT GCGGCACTGC GTGAGGCAGG GGATTTGATC CTCAGTCTGG AGTCCTCCTG CGACGAGACT GCCATGTGCA TCATGGATTC ACACGGTGTG GTCTGTGCAA ACGTTGTCGC AACTCAAATT GACTTCCACG CCCGTTTTGG TGGCGTCGTG CCCGAGATTG CTTCTCGCAA GCATACCGAG GCTATTGTGG GTCTCTTTGA GGAGACCATG GCCCGTGCGG GCGCTCATTT TGGATGCGAT ACGCTAGTGC CGTCTGACCT GGCTGCCGTT GGTGTTACCG CAGGTCCTGG TCTTGTTGGT GCGCTCGTTG TGGGCGTGGC ATTTGCCAAG GGCTTCTGCG TGGCTACTGA CCTGCCGCTT ATTCCCGTTC ATCACCTGGA AGGTCACCTG CTGGCCAACC TGTTTGAGAC ACCAGACCTG GAGCCACCGT TTGTGGCAAG CTTGGTCTCA GGTGGTAATA CTATGCTGGT ACACGTGCGT GCCTGGGGAG ATTACGTGGT TCTGGGTTCC ACTATTGACG ACGCCGTGGG TGAGGCCTTT GATAAGGTTG CTAAGGCGCT TGGTCTGGGC TATCCAGGTG GCCCTGTAAT CAGTAAACTT GCAGCTCAGG GTAACCCTAA GGCTATTCAT TTCCCGCGTG CAATGATGCA CAGCGGCGAC TATTCCTTTA GTCTCTCGGG CCTAAAGACT GCCGTTATCA CCTATATTGA AGGCGAGAAT CGCGCTGGTA GAGCTATCAA TCTGCCCGAC TTGGCCGCTT CGTTTGAGCA GGCTGTTATT GACGTACAGG TTGCAAAGGC TAAAACTGCT GTTGAGGAGA CAGGTGTCTC CGATTTTTGC GTGGGTGGTG GCGTTGCTGC AAACCCCGCA CTTAGAGCTG CATATAAAGA AACCTTTGGT AAGATGGGCG TTCGAGTGAC AGTGCCTCCG ATGTCGGTTT GCGGCGACAA TGCCGCAATG ATTGCCGTGG GTGCTCTTCG CAGTTATCGT ACGCAGGGTT TCTCGCCATT GACCTTGGAT GCAAACCCCA ACGCGCAGCT GGGATTGTGG TCGTCGGATG CGGCACCCGT TATCCCAAGC GGCATGTAA
|
Protein sequence | MLAIKNDTSV VLAVDTSTDM LACTVARLTK RNADAAVAAA ADGASAADGG FNVEVLASTD HLCRRQANVE LVSSVQEALV AADLTMADVD AVIAGRGPGS FTGVRIGVAT AKGISCGSGL PLYGASALDA MAFSAWKVGV RGTVGVVADA MRGEVYPGIY LLDDAGAHRT FPVETVFKAD ACVEEWSSRT DKDQFTLTGN GLVKYRERFE RAGFSTYTDE ATWFPTGEGL VRAVCMPEYQ QAGAGDPALV LPIYTRLSDA EESERKRLGL KEPATVALTG VDDELANIHL QLRPMTVNDL DQVAELEAAT YAKAAHSTWS KQMFYDELSG VGRSWWLAHD RGTVIGFAGG RLAGAQFEVE EVVVTPERRR QGIASKLVER VAYDAQMLGA SAITLEVEED NAPAQGAYSK LGFTEVGRRP GYYGSDCAAL LMTAQLPLAV GAGFEARNPE PHTSVRPWPI VAGERSEETL AALREAGDLI LSLESSCDET AMCIMDSHGV VCANVVATQI DFHARFGGVV PEIASRKHTE AIVGLFEETM ARAGAHFGCD TLVPSDLAAV GVTAGPGLVG ALVVGVAFAK GFCVATDLPL IPVHHLEGHL LANLFETPDL EPPFVASLVS GGNTMLVHVR AWGDYVVLGS TIDDAVGEAF DKVAKALGLG YPGGPVISKL AAQGNPKAIH FPRAMMHSGD YSFSLSGLKT AVITYIEGEN RAGRAINLPD LAASFEQAVI DVQVAKAKTA VEETGVSDFC VGGGVAANPA LRAAYKETFG KMGVRVTVPP MSVCGDNAAM IAVGALRSYR TQGFSPLTLD ANPNAQLGLW SSDAAPVIPS GM
|
| |