| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0178 |
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| Symbol | |
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| ID | 8413026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 207146 |
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| End bp | 208333 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645021750 |
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| Product | protein tyrosine/serine phosphatase |
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| Protein accession | YP_003179205 |
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| Protein GI | 257783988 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2365] Protein tyrosine/serine phosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGT TGCAGAAACG GTTTACTGCG TTTTTGAGTA TGTTTATGGC TCTGGTGCTC
TCGTTTATGT TGGTAGGGTG CAACGTGGCG CCTTCTCAGC AAGAGAACAA GCCTGCGGAG
CAAACGCAGC AGAAAGAGCT TACAACTGGG GCGCTTGCTG CTACGCATGA GACCAAGTTT
GGTGGTATCT ATCTGGATAT TACCATCGAG GACTTTAATA AGATGGGCTT TGAGTTTGGT
GATAGCGTAG ACGTTACGTT TAGCAACGGC TACAAGCTTA TCGATATTCC GTACTATAAC
GGCTACTATA CCAAGACTGG TGAAGCTTTG ATTAGCGGAT ATCCCGGATA TCCTCATATT
GACGTATGCG TGAACAACGG AGATCCTCTG TGGGAGACCG CTGGTCTTAA AGAGGGCGAT
ACCGGCACCG TAACTCTGCA CGAGAAGCAG AAATACGCAA CAGTTCAGAA GGCTCTTGGC
GCAACATACA CTAAAAATCG CTCTGACTAT GCAAGTGACG AGGTCTTTGC CAACTTCCGC
GCTATGAGGG GCGGAAATAT GGCAGAGAAC GTAATGTATC GTTCGGCTTC ACCTATTGAT
AACCAGAACA ATCGTGCTCC TTATGCTGCC GAGCTTGCTC AAAAATGCGG CGTTCAATAC
ATTTTGGATC TTGCTGATAG CAATGAAGAG ATTGAGGGCT ATTACCAGAA AGCCGATTAC
GATGTTTCTT GGCATAAGGG ACTATATGAG GCCGGAAACG TTACGGCTCT GGACTTGAAT
GCAAATTATC GTAGTAAAAA GTATGCTGAG CGTCTGGTTG CAGGCTTGCG CGAGATGATT
AAGCATGAGG GACCATATCT TACTCACTGC ACGGAAGGCA AGGATCGTAC GGGCTTTACC
TGCGCTTTGC TTGAAGGCCT TTGCGGTGCA TCGTATGAGG AAATGCGCGA TGACTATATG
GCTACCTATG ACAACTATTA CGGTATTAGC GAGAAGAACG ACAAAGCTCG CTACGATGCT
GTCGTAGACG TTAAATTCAA CGACATTGCT CTTTGTGTTG GTGGACAGCC TCTGGGTGGC
TCGCTTGACG GTTTAGATTA TGCAGCTGGT GCTCGTAAGT ATCTGACCGA CGCTGGAATG
ACTGATGCCG AAGTCGATCA GCTTATTGCA AAACTGACAA AGAAGTAG
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| Protein sequence | MQKLQKRFTA FLSMFMALVL SFMLVGCNVA PSQQENKPAE QTQQKELTTG ALAATHETKF
GGIYLDITIE DFNKMGFEFG DSVDVTFSNG YKLIDIPYYN GYYTKTGEAL ISGYPGYPHI
DVCVNNGDPL WETAGLKEGD TGTVTLHEKQ KYATVQKALG ATYTKNRSDY ASDEVFANFR
AMRGGNMAEN VMYRSASPID NQNNRAPYAA ELAQKCGVQY ILDLADSNEE IEGYYQKADY
DVSWHKGLYE AGNVTALDLN ANYRSKKYAE RLVAGLREMI KHEGPYLTHC TEGKDRTGFT
CALLEGLCGA SYEEMRDDYM ATYDNYYGIS EKNDKARYDA VVDVKFNDIA LCVGGQPLGG
SLDGLDYAAG ARKYLTDAGM TDAEVDQLIA KLTKK
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