| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0173 |
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| Symbol | |
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| ID | 8413021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 198901 |
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| End bp | 199842 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645021745 |
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| Product | Transketolase central region |
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| Protein accession | YP_003179200 |
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| Protein GI | 257783983 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3958] Transketolase, C-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACG TACAGAAGAT TGCCACCAGA GAGGCATACG GAAAAGCTCT GATTGAACTT
GGTAAAGAGC ACGATGACCT TTTGGTCTTC GACGCTGACT TGGCAGAGGC TACTCGCTCC
GGAAAGTACG GCGAGGAGTA TCCTAATCGT TTTGTGGACT GCGGCATTGC TGAGGCTAAT
ATGATTGGTA TGGCAGCCGG TGTTGCAGCT ACTGGTCACA AGGTCTTTGC AACTTCGTTT
GCAATGTTCA CTTCTGGCCG TGCGTTTGAG CAGATTAGAA ATTCGGTAGG TTATCCTCAC
CTGAACGTTA AGATTGGCGC TACTCACGGA GGACTCTCGG TAGGAGAGGA CGGCGCCACT
CACCAGTGCA ACGAGGATAT TGCTGTTATG CGTACCATCC CTGGCATGAC GGTTATCATC
CCATCCGACG CTGTTGAGGC CGAAGCCGCT GTCAAGGCTG CTTACGACCA TGACGGTCCT
GTCTACATGC GCTTTGGTCG CCTTCCTGTT CCTGTGTTCA ACACCAACCC TGATTACCAC
TTTGAGCTTG GCAAAGGCAT TGTCCTTAAG GAGGGTACTG ACGTTACGCT GGTAGCCTGT
GGCCTTATGG TTCCCGTGGC TCTTGAGGTG GCCGAGCAGC TGGCAGCAGA GGGTGTCAAC
GCTGAGGTCA TCAACATCCA CACCATTAAG CCTCTGGATA CCAAGCTGAT CGCCGCTTCT
GCAACAAAGA CTGGCAAGGT TGTGACTATT GAGGAGCATT CCGTCATTGG TGGTTTGGGT
AGTGCAGTTT GTCAGGCTCT TTCCGAGAAT ACCCCTGTTC CAGTCAAGGT CATCGGCGTC
CAGGATACCT ATGGCGAGTC CGGACCAGCA CTTCAGGTTC TTGCTAAGTA CGGCCTGGAT
ACTCCAAGCG TTCTCGTATC CGTTAAGGAG TTCTTGAAGT AA
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| Protein sequence | MADVQKIATR EAYGKALIEL GKEHDDLLVF DADLAEATRS GKYGEEYPNR FVDCGIAEAN
MIGMAAGVAA TGHKVFATSF AMFTSGRAFE QIRNSVGYPH LNVKIGATHG GLSVGEDGAT
HQCNEDIAVM RTIPGMTVII PSDAVEAEAA VKAAYDHDGP VYMRFGRLPV PVFNTNPDYH
FELGKGIVLK EGTDVTLVAC GLMVPVALEV AEQLAAEGVN AEVINIHTIK PLDTKLIAAS
ATKTGKVVTI EEHSVIGGLG SAVCQALSEN TPVPVKVIGV QDTYGESGPA LQVLAKYGLD
TPSVLVSVKE FLK
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