| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0166 |
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| Symbol | |
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| ID | 8413013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 192470 |
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| End bp | 193120 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645021737 |
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| Product | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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| Protein accession | YP_003179193 |
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| Protein GI | 257783976 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.175501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCAGG ATAACGCTAC TAACCAGAAT ACTAAGGCTG TATTTGATCC CAACAAGACC
ATAGTTGTGG CAACGGGAAA CACTCATAAG TTAGTTGAGA TTGAGGCAAT TCTTTCTAAA
GTTATGCCTG GTATAAGTTT TGTTGCCCTT GGTCAACTGG GTGATTTTCC TGATCCAGAA
GAAAACGGAA AGACTTTTCG TGATAATGCG TTAATTAAAG CAATGGCTGC ACTTGATGAG
GTAGATTGTG TAGCAGCTAT TGCTGATGAC TCTGGTCTTT GCGTAGATGC TCTTGATGGC
GCTCCTGGAA TTTATTCTGC ACGTTATGCA GGAGAGCATG GTAATGACGC CGCTAACAAT
AAGAAACTGT TGGCTGAGCT TGCTGATGTT GCAGACGCTG AGCGTACTGC ACGCTTTCAC
TCAACTGTTG CCCTCGTATA TCGTGACGGT CGCGTACTTG TAGGTGAGGG AGACTGTGAA
GGCGTTATTG GTCATGAGCC AAAGGGCTGC AATGGTTTTG GTTACGACCC GCTGTTTTGG
CCGAATGATG CACCAGGTAA AGCTATGGCA GAACTTTCTC CCAATCAGAA AAATGCTATT
TCCCACCGTT TCCATGCACT GCAAAATCTC TCAGAGCAAA TTCTTCATTA A
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| Protein sequence | MSQDNATNQN TKAVFDPNKT IVVATGNTHK LVEIEAILSK VMPGISFVAL GQLGDFPDPE
ENGKTFRDNA LIKAMAALDE VDCVAAIADD SGLCVDALDG APGIYSARYA GEHGNDAANN
KKLLAELADV ADAERTARFH STVALVYRDG RVLVGEGDCE GVIGHEPKGC NGFGYDPLFW
PNDAPGKAMA ELSPNQKNAI SHRFHALQNL SEQILH
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