| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0157 |
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| Symbol | |
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| ID | 8413003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 181155 |
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| End bp | 182012 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645021727 |
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| Product | HAD-superfamily hydrolase, subfamily IIB |
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| Protein accession | YP_003179184 |
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| Protein GI | 257783967 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTAAGC TTGTTTTATC TGATATGGAC AACACGCTAG TGCCTTTTGG AAATAGGCGT
GTGTCGGACT TCACGCGCAA GGCTATTCAC ACGCTCCTTG AAGAAACGGA CATTGCATTT
GGCCCGTGTA CCGGCCGAGA TTACGTTGAG TTGATGCGTC TTTTCAGCCT TGATGAGGCA
TGCATGCAAA CGGGAGTCAT GTCAACGGGT AAACGCGTGC TGTACAGAGG TAAGACCATC
TCGCTTTCTA TCTTTGATCA CAAAACGTTG CAGGGTGTCG CAGACGCTCT TGCTGACGAG
AAGAACATGT TCTTGGTTTG TTATCCCGAG AAGACCAACC TCTTCAATCC GGCATATGTT
GTAGGTCCGC TGGACAAAGA CATTCTTGCC GATTACGAGC GCAAATTGGT GTTTGTCTCG
GGTATTGTTG ATCAGGTTCC GGATGACGTC GATTTTGTCG CCGCAACAAT TGCCTGTCCA
GGCACGGAGA AGGACATGGA GCGCTGCCAA AAGAAAGTTG CCGCAGCTTG TCCTGACGTG
TATACCATGT CGGTAGTTCC ACAGTGGTTT GATGTGCTGC CCAAGGGCAT ATCTAAGCTG
ACTGGGTTTG AAACACTCCT AGAAAGAACA GGCATTTCTC CTGAAGAAGT ACTCGTTTTT
GGAGACGGCG AGAATGACGT TGAGATTTTA AGTAAAGTTC CGCACTCAGT GGCGGTGGCA
AATGCAATTC CGGAGGTTAA GCAGGTAGCA AAGCATCACG TAGGTGCATC TGCAGACGAT
GGTGTTGCAC ATGCTCTGCT TGAGCTGGTG CGCGCGACAA AAGCAGGGGA GACTCCCCGT
TTTATGATGG AGAACTAG
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| Protein sequence | MIKLVLSDMD NTLVPFGNRR VSDFTRKAIH TLLEETDIAF GPCTGRDYVE LMRLFSLDEA
CMQTGVMSTG KRVLYRGKTI SLSIFDHKTL QGVADALADE KNMFLVCYPE KTNLFNPAYV
VGPLDKDILA DYERKLVFVS GIVDQVPDDV DFVAATIACP GTEKDMERCQ KKVAAACPDV
YTMSVVPQWF DVLPKGISKL TGFETLLERT GISPEEVLVF GDGENDVEIL SKVPHSVAVA
NAIPEVKQVA KHHVGASADD GVAHALLELV RATKAGETPR FMMEN
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