Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0153 |
Symbol | |
ID | 8412999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 177900 |
End bp | 178472 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 645021723 |
Product | hypothetical protein |
Protein accession | YP_003179180 |
Protein GI | 257783963 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.266045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTACTC CAGAGTCCTC TTCAACCAGC AAGCGCTCGT CGGCCGACGC CGCTGCAATC GCCGTTGCGA CCGCGACCAA ACCGGTCACG TACACATACA ACCGACGTCG TTACGTCATT GACGTGCTAC TGCCCAACTA CGTCTCGATA GTCGTACTTA TTGCAGCAAT TATTTTGTTT GCGCTCGGAT TTATCCGCTG GTTGATGCTC TTTTTGGCTG TGGTTTGCCT GTATTCGATT CTCAACGCGT TTCTCGCACA TGCCTATCCT GAACAGGTTA TTCTCGCCCC AGATTCAATC ACATTTGTAA CGGGTAAACA TAAATCAACT TACAAGTTGT CTCAAATTAC GCAGATTCGC GTGCGAGAGG CCTCGCAAGG ACTGCGCTCG TACGTACGCA TTAACAAGGC CACTCCGCTG CAAGGTCGCT TCTATTTGAC CTGTGCAGAT ATGACCGATG CGGAGGGTAA TGATGCACGA GAGGTCTATA AGTTGCTACT GGACCTCGAG GCAAAACTAG ATCCTAACGG ATTGCGCGTG CGAGCGCGCA ACCAGCAACA GAAAGGGGAG TAG
|
Protein sequence | MSTPESSSTS KRSSADAAAI AVATATKPVT YTYNRRRYVI DVLLPNYVSI VVLIAAIILF ALGFIRWLML FLAVVCLYSI LNAFLAHAYP EQVILAPDSI TFVTGKHKST YKLSQITQIR VREASQGLRS YVRINKATPL QGRFYLTCAD MTDAEGNDAR EVYKLLLDLE AKLDPNGLRV RARNQQQKGE
|
| |