Gene Apar_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0153 
Symbol 
ID8412999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp177900 
End bp178472 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content51% 
IMG OID645021723 
Producthypothetical protein 
Protein accessionYP_003179180 
Protein GI257783963 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.266045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACTC CAGAGTCCTC TTCAACCAGC AAGCGCTCGT CGGCCGACGC CGCTGCAATC 
GCCGTTGCGA CCGCGACCAA ACCGGTCACG TACACATACA ACCGACGTCG TTACGTCATT
GACGTGCTAC TGCCCAACTA CGTCTCGATA GTCGTACTTA TTGCAGCAAT TATTTTGTTT
GCGCTCGGAT TTATCCGCTG GTTGATGCTC TTTTTGGCTG TGGTTTGCCT GTATTCGATT
CTCAACGCGT TTCTCGCACA TGCCTATCCT GAACAGGTTA TTCTCGCCCC AGATTCAATC
ACATTTGTAA CGGGTAAACA TAAATCAACT TACAAGTTGT CTCAAATTAC GCAGATTCGC
GTGCGAGAGG CCTCGCAAGG ACTGCGCTCG TACGTACGCA TTAACAAGGC CACTCCGCTG
CAAGGTCGCT TCTATTTGAC CTGTGCAGAT ATGACCGATG CGGAGGGTAA TGATGCACGA
GAGGTCTATA AGTTGCTACT GGACCTCGAG GCAAAACTAG ATCCTAACGG ATTGCGCGTG
CGAGCGCGCA ACCAGCAACA GAAAGGGGAG TAG
 
Protein sequence
MSTPESSSTS KRSSADAAAI AVATATKPVT YTYNRRRYVI DVLLPNYVSI VVLIAAIILF 
ALGFIRWLML FLAVVCLYSI LNAFLAHAYP EQVILAPDSI TFVTGKHKST YKLSQITQIR
VREASQGLRS YVRINKATPL QGRFYLTCAD MTDAEGNDAR EVYKLLLDLE AKLDPNGLRV
RARNQQQKGE