| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0152 |
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| Symbol | |
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| ID | 8412998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 176372 |
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| End bp | 177796 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645021722 |
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| Product | PTS system Galactitol-specific IIC component |
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| Protein accession | YP_003179179 |
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| Protein GI | 257783962 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3775] Phosphotransferase system, galactitol-specific IIC component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0975812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAGTAG TAATTTCATT CTTCTCGTTC CTTCAGGGCC TCGGTGTTGC AGTCATGATG
CCAATCATCC TGACCATCAT CGGTTGTGCT CTGGGAGCAG GCTTTGGTAA GAGCCTTAAG
GCTGGCCTTA TGGTAGGTGT TGGCTTTATC GGCCTTAACC TTGTCATCAA CCAGCTGTTT
GGTACCGCAA TTGGACCTGC AGTTCAGGAA ATGATTCACC GCTTTGGTCT GACTCTTAAC
GTCATCGACG TTGGTTGGCC AGCAGGTGCA GCAATTGCAC TTGGCACCAC CATTGGTCTG
GTTATCATTC CTTTGGCACT CATCGTTAAC CTGCTTCTTG TTTTGGTTAA CTTCACTCAG
ACTGTCAACG TTGATATCTG GAATTACTGG CACTACGCAT TCGTCGGTTC TCTTGTTGCA
AATGTTACCA ACAACATCAT GCTTGGCTTT GCTGCAGCAA TCATCGATGA GGTCATCCTG
CTTGTTCTTG CTGACGCAAC TGCAAAGGAT GTCCAGAAGG CGCTCAACAT GCCAGGCGTT
TCTATCTCTC AGGGCTTCTC GCTTGCTTAT GCTCCAGTTG CTATGGGTCT GAACTGGCTG
ATCGATAAGA TCCCTGGTGT TCGTGACATT GACATCGACG TCGAGTCCAT GCAGAAGCGC
TTTGGCGTCT TCGGCGAGCC ACTGTTCATC GGCACCGTCA TCGGCCTCAT CATCGGCTGC
GTTGCATACT TCGACGCTGC TGATATCGCA GGCTCCATCA CCAAGATCCT GACCATCGGC
GTCACCCTTG GTTCCGTTCT GATTCTTATT CCTCGTATGG CAGCTCTTCT TATGGAAGGC
CTCCTGCCAA TCTCCGAGGC AGCTTCAAAC TTCATCCAGC AGCGCGTTAA GAACCGCGGC
AACATCTGGA TTGGCCTCGA CTCTGCAGTT GCAGTTGGCC ACCCAGTAAC TCTGTCTCTG
GCTCTTATCT GCATTCCTCT GATGGTTCTG TTTGCACTTC TGCTTCAGCC AGTTGGCAAT
CAGACTCTGC CATTTGTTGA CCTTGCCGCT GGCACCTACA TGCTCGCAGT CGCAGTACCT
GTCTGCAAGG GTAACGGCTT CCGCGGCCTG ATCATCGGCA TTGTTTCCGT CATCATCGGC
CTGCTGATCT CCACCGCTCT TGCTCCACTC ATCACACAGT CTGCAACTCA GGCTGGCTTC
GACATCGCAG CTGCAGTTGG TAGCACCGGC GTTGCTGGTT CTTCCCTGAT CACCGTCCTT
TCCGACGGCG GCAGCCCACT GTCCGGCCTG TTTGTTCTGT TCTCCAGCAT CAACCCAATC
GTTGGCGTTG TAGTAACTGG CGCAATCGCA GTTGCACTTG CAGTGTGGAA TCGCAGCCGC
ATCCTCAAGG AGGCTGCTGC AATGCACGAG GCTCAGGAGG CTTAG
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| Protein sequence | MEVVISFFSF LQGLGVAVMM PIILTIIGCA LGAGFGKSLK AGLMVGVGFI GLNLVINQLF
GTAIGPAVQE MIHRFGLTLN VIDVGWPAGA AIALGTTIGL VIIPLALIVN LLLVLVNFTQ
TVNVDIWNYW HYAFVGSLVA NVTNNIMLGF AAAIIDEVIL LVLADATAKD VQKALNMPGV
SISQGFSLAY APVAMGLNWL IDKIPGVRDI DIDVESMQKR FGVFGEPLFI GTVIGLIIGC
VAYFDAADIA GSITKILTIG VTLGSVLILI PRMAALLMEG LLPISEAASN FIQQRVKNRG
NIWIGLDSAV AVGHPVTLSL ALICIPLMVL FALLLQPVGN QTLPFVDLAA GTYMLAVAVP
VCKGNGFRGL IIGIVSVIIG LLISTALAPL ITQSATQAGF DIAAAVGSTG VAGSSLITVL
SDGGSPLSGL FVLFSSINPI VGVVVTGAIA VALAVWNRSR ILKEAAAMHE AQEA
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