Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0148 |
Symbol | |
ID | 8412994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 169275 |
End bp | 169982 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 645021718 |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003179175 |
Protein GI | 257783958 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAAA CAATGTCTGT ACCTGCTGTT TTGTCAGTTT GTAAGCTTGA TCGACGCACT GCTAGAACGC GTGCGGCACT CAGAAAGGCC CTGGCAGAAG AGATAGACGC TACCGGCGAT CTTACCTCTG TGACTGTTAC GGGCGTAACG GAGCGCGCCG GCCTTACGCG TCGAACCTTT TATTCCCACT ACAAAGACAT CCCTGATTTG GTGCTTCACA TTGAAAAGGA AGCATTAGCA GAGCTTCGGC CTGCTGTTGA GCAGCTTGCT CGCGTCAACC TTGCCGAACT CAGGGAGGCA ATCGACTCCT ACAAACCATG CCCTGGCGCA ACTGAGATGC TCCGTAGCAT TCGTAAGCAC GGCTTCTACC TGCGTCCTTT GTTGGGCAAC GGTGGAGACC CTGCGTTCCA GGAAAAGCTT AAGCACCTGG TGCACGAGGT TATCGCTCAG CGTGCCTTAC ACGACCTTGA CCCACGCGCA CTTGGTTCTT TCTTTGACTA CTATCTGACC TTTGCAATTT CTGCTGAGGT TGGCGTCCTT ATCCGCTGGT TAATCGGCGG CATGCGCGAG AGCGACGAGC AGATGGCGGG TCTTATGACC GGTCTCATGT TTGTTGCACC TGGCGATTTG TACGGCAAGC CAATTAAGCT GGACGTTCCA CGATTTGCGC TTGCAACTCT TGTTCTTGGA GAGGAAAACA ATGATTAG
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Protein sequence | MTQTMSVPAV LSVCKLDRRT ARTRAALRKA LAEEIDATGD LTSVTVTGVT ERAGLTRRTF YSHYKDIPDL VLHIEKEALA ELRPAVEQLA RVNLAELREA IDSYKPCPGA TEMLRSIRKH GFYLRPLLGN GGDPAFQEKL KHLVHEVIAQ RALHDLDPRA LGSFFDYYLT FAISAEVGVL IRWLIGGMRE SDEQMAGLMT GLMFVAPGDL YGKPIKLDVP RFALATLVLG EENND
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