| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0146 |
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| Symbol | |
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| ID | 8412992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 166686 |
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| End bp | 167231 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645021716 |
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| Product | cytidine deaminase |
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| Protein accession | YP_003179173 |
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| Protein GI | 257783956 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGAGG TAAAGGGTTC TTGCCACGTC TCTAACGAGG CTCTTGTTCA GCTTGCTATT
GAGGCTCGTA ATCACGCTTA TGTACCGTAC TCTCATTATG CTGTTGGAGC TGCGCTTTTA
TGCTCTGACG GTACGGTGTA CGGTGGCGCC AATCTAGAAA ATGCTGCGTA TACGCCTTCT
AACTGTGCTG AGCGCACGGC GTTTTTCCGC GCAGTGTTTG AGGGTCACAG AGATTTTGTG
GCTATTGCAG TTGTCGGCGG TCCTGAGGGA GAAGCTCCAA CAGCTTGGTG TACTCCTTGT
GGCGTATGCA GACAGGTTAT TCGTGAATGG TGCGATCCTG CTACCTTCCG CATTGTGTTG
GGTAAGGCAG ATGTGGCTCC TCGTGAGTAT CTGCTCCAGG ATATCTTGCC CATGGGATTT
GGTCCAGAGG ATTTGGGTGA GTCCAGTCCT GCCGGTGCAT CAAGTGACGA CGCTGTGAAG
GGCACTACAG GTCACGAGCA CGGTTGTACT TGCGGGTGTG ACAAGCACAG TAAGAGTAAC
CAGTAA
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| Protein sequence | MAEVKGSCHV SNEALVQLAI EARNHAYVPY SHYAVGAALL CSDGTVYGGA NLENAAYTPS
NCAERTAFFR AVFEGHRDFV AIAVVGGPEG EAPTAWCTPC GVCRQVIREW CDPATFRIVL
GKADVAPREY LLQDILPMGF GPEDLGESSP AGASSDDAVK GTTGHEHGCT CGCDKHSKSN
Q
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