| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0143 |
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| Symbol | |
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| ID | 8412989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 163045 |
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| End bp | 164574 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645021713 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179170 |
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| Protein GI | 257783953 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAGTCA GTTCGGATTA CGCTGTTCAG ATGCATGGCA TTACCAAAGT TTTTGGATCG
TTTAAAGCTC TTGACGCCGT AGACCTTAAC GTGCGCAAGC AAACTGTCCA CGCCATTTTA
GGAGAGAACG GCGCAGGTAA AAGTACGCTC ATGAACGTAC TGTATGGCCT GTATTCTGCT
GATGAGGGCG AGGTTTACCT CAACGGAGAG CGTGTATCCA TATCTGATCC AAACGATGCT
ATCGCTCACG GTATTGGTAT GGTTCACCAG CACTTTATGT TGGTCGAGAA TTTTACTGTT
ACAGAAAATA TTGTTTTGGG TAATGAGGTC ACCAAAACCG GTGGCATTCT TGATCCAAAA
CGAGCTCGCG AGAAGGTCCT TGAAATTGTT GAGGAATACG GCTTTGACGT AGATCCTGAC
GCTAAGATTG AAGACATTTC TGTTGGTATG CAGCAGCGTG TTGAGATCTT AAAGGCCCTA
TATCGCGGTG CTGATACGCT GATTCTTGAT GAGCCTACGG CAGTGCTTAC GCCACAGGAG
ATTGAGAAGC TTATCCAGAT CATGCATGAC CTGGTAAGCA AAGGTAAAAC CATCATTGTT
ATTACTCACA AGCTTAAAGA GATTATGTCA TCTGCAGATG AATGCACTAT TATTCGCCGC
GGTAAGTACA TGAGCACTGT TGATGTCTCC AAGACATCAG AGACTGAGCT TGCAACACTT
ATGGTGGGTA GAAACGTTAA CCTGCATGTT GAAAAGAAGC CAGCAACTCC TGGTGAGGTT
GTGCTTTCTA TTAAGGATCT CCACGTCAAG GATGAGCGTG GTATTGAGCA GGTAAACGGC
TTTAATTTGG ATATTCGTGC CGGCGAGATT GTTGGTCTTG CGGGTATCGA CGGCAACGGT
CAGAAAGAAC TCGCCGATGC CATAAACGCA ATGGTCAAGC CCGAGTCGGG CACCATCACC
GTCAAAAATG AAGAGATTCA AGGTACAACT CCTAAGACGG TCATTGATCA TGCGGTTGCA
ACCATTCCTT CAGACCGTCA TCGTTGGGGC TTGGTCCTGC CATTTACGGT TGCCGAGAAC
ATGATTCTTG AGCGCCACAA TGAGGAGATT TTTGGCAAGG GCATTGCGCT TGATTTGGCA
AAGATGAAGG AATTCTCTCA GAAGTTGATT GACGAGTTTG ATATTCGCCC TGCAGAGTGC
TCCGATCATC AAGCAGCAGG ACTTTCTGGT GGTAACCAGC AGAAGGTTAT TATCGCCCGA
GAGGTCTCTT CCAACCCAGA CGTTCTTATT GCCATCCAGC CAACTCGCGG CCTTGACGTT
GGTGCAATTG AGTTTGTTCA CAAAGCGCTG ATTCGCGAGA GGGACCGTGG AGCAGCAATT
TTGCTGATTT CCTTTGAGCT GGATGAGATT ATGGACGTTG CCGATAAGAT GGCAATTATT
TACGCCGGCA AGAATGTTGG CGAGTTTGAC CAAGGTACTA TCACTGAAGA GCAGGCTGGC
CTGCTGATGG CAGGAGGTGA CGCCGAGTGA
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| Protein sequence | MEVSSDYAVQ MHGITKVFGS FKALDAVDLN VRKQTVHAIL GENGAGKSTL MNVLYGLYSA
DEGEVYLNGE RVSISDPNDA IAHGIGMVHQ HFMLVENFTV TENIVLGNEV TKTGGILDPK
RAREKVLEIV EEYGFDVDPD AKIEDISVGM QQRVEILKAL YRGADTLILD EPTAVLTPQE
IEKLIQIMHD LVSKGKTIIV ITHKLKEIMS SADECTIIRR GKYMSTVDVS KTSETELATL
MVGRNVNLHV EKKPATPGEV VLSIKDLHVK DERGIEQVNG FNLDIRAGEI VGLAGIDGNG
QKELADAINA MVKPESGTIT VKNEEIQGTT PKTVIDHAVA TIPSDRHRWG LVLPFTVAEN
MILERHNEEI FGKGIALDLA KMKEFSQKLI DEFDIRPAEC SDHQAAGLSG GNQQKVIIAR
EVSSNPDVLI AIQPTRGLDV GAIEFVHKAL IRERDRGAAI LLISFELDEI MDVADKMAII
YAGKNVGEFD QGTITEEQAG LLMAGGDAE
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