| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0141 |
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| Symbol | |
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| ID | 8412987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 160942 |
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| End bp | 161652 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645021711 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | YP_003179168 |
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| Protein GI | 257783951 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTACTA CCCCAACTCC CCATAACGCT GCTGTTGAGG GACAGATTGC TAAGACTGTC
CTCATGCCAG GTGATCCTCT GCGCGCAAAA CTTCTTGCAG ACACCTATCT GGAGAATGTT
GAGCAGTTCA ACACCGTTCG CAACATGTTT GGTTACACCG GTACCTATAA AGGACAGCCA
GTCTCCGTTA TGGGTTCTGG TATGGGTATG CCTTCTATTG GTATTTATTC TTACGAGCTT
TTTAATTTCT ACGGAGTTGA CAATATTCTC CGCATTGGCA GCGCTGGTGG CCTTGCTCCT
GAGGTAAAGC TTAGAGATAT TGTTATTGGT ATGTCTTCCA GCACTGATTC TAATTATCCA
TCACAGTACG GAATGCCTGG AACTATTGCG CCTACTGCAG ACTTTGGTCT GTTGAGTAAG
GCTGTTGCTG GTGCAGAGAA GCTGGGCTAT CCCGTTCGCG TTGGTAATAT CCTGGCAAGT
GACGTGTTCT ACACCGCAGA CAACTCACAT TCAAAATGGG CAAGCATGGA TGTTCTTGCC
GTTGAGATGG AGTCGGCAGC TCTGTATCTC AACGCCATGT ACGCTCATAA GCATGCGCTT
ACGCTGCTAA CTATCTCTGA CCTTCCTCTT ACAGGAGAAG CACTTACTGC TGAAGAGCGT
CAGACTAGTT TCACACAGAT GATGGAAGTT GCTCTTTCTG TTGTTGCTTA A
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| Protein sequence | MATTPTPHNA AVEGQIAKTV LMPGDPLRAK LLADTYLENV EQFNTVRNMF GYTGTYKGQP
VSVMGSGMGM PSIGIYSYEL FNFYGVDNIL RIGSAGGLAP EVKLRDIVIG MSSSTDSNYP
SQYGMPGTIA PTADFGLLSK AVAGAEKLGY PVRVGNILAS DVFYTADNSH SKWASMDVLA
VEMESAALYL NAMYAHKHAL TLLTISDLPL TGEALTAEER QTSFTQMMEV ALSVVA
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