Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0139 |
Symbol | |
ID | 8412985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 158252 |
End bp | 159334 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 645021709 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003179166 |
Protein GI | 257783949 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTACCA ATCGAGAACA GATGATTTTC AACTGGATTA AAGAGCAGCC TTCCATTACT CAGAAGGAGA TTGCAGAACG CGCAGGTATT TCACGTTCTT CTGTTTCGGT TCACATCTCT AACCTCACCG CAAAGGGCGC TATTTTGGGT CGTCGTTACA TTTTGAGCGA ACGTCCCTAT TTTATTGTGA TTGGCGCTGC CAACATGGAT ATTGCTGGTC GACCAGAGAC TTCTCTTGTG GCAGGAGATT CAAATCCTGG CAAAGTCACC ATATCCTTTG GTGGCGTTGG CAGAAATATC GCACACAACC TGGCCCTTCT CGACAGCGAC GTACGTCTGC TTACCGCCTT TGGCGAGGAC TATCGTGCCC GTGAGCTTAA AGAGGGCTGC CTAGACTGCG GTATTGACAT CGATGCATCC ATTACTGTTC CAGGCGCTTC CACTTCTACC TATCTCTTCA TTATGAACGA GCACGGTGAG ATGCAGGAAG CCATCAATGA TATGCAGATC TACGAGTATG TTACCCCTGA ACGTATCGAA GAGCGCCTAG ATGTTATCCA GCATGCCGCA GCTTGCGTGA TTGACACTAA CCTGCCTCAA CAGACCATTG AGTTTATTGC CAAGAACGTG ACCTGCCCTA TTTTCTGCGA TCCCGTTTCT TCTATTAAAG CGCAAAAACT TAAGAAAGTC CTAGGCAAAC TTTACACGCT CAAACCAAAT CGCCTTGAGG CTGAAATGCT CTCGGGCATC AAGATTACTG ACGACGCTTC CCTTGAAGCA GCAGCTCATG AGCTACTTGC AACAGGTCTT AAGCGTGTAT TTATCTCTCT TGGCGAGAAG GGGCTTCTTT GTGCTGATCA CGAGAAGACC ATCCGCTTAC CACTGCTCCC AGCAAAGCTA ATCAACATGA CAGGCGCGGG AGATGCCATG ATGGCAGGAA TTACCTGGGC GTATACCCAG GGTATGACGC TTGAGCAAAC TGGACTGGTA GGTATGGCTG CCTCCAGCAT AGCCATTGAA GGAGAGGAAA CCATCAACAG TCAGCTCAAC GTTGAAGAGG TTATCAAGCG CGCAGGTATT TAG
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Protein sequence | MLTNREQMIF NWIKEQPSIT QKEIAERAGI SRSSVSVHIS NLTAKGAILG RRYILSERPY FIVIGAANMD IAGRPETSLV AGDSNPGKVT ISFGGVGRNI AHNLALLDSD VRLLTAFGED YRARELKEGC LDCGIDIDAS ITVPGASTST YLFIMNEHGE MQEAINDMQI YEYVTPERIE ERLDVIQHAA ACVIDTNLPQ QTIEFIAKNV TCPIFCDPVS SIKAQKLKKV LGKLYTLKPN RLEAEMLSGI KITDDASLEA AAHELLATGL KRVFISLGEK GLLCADHEKT IRLPLLPAKL INMTGAGDAM MAGITWAYTQ GMTLEQTGLV GMAASSIAIE GEETINSQLN VEEVIKRAGI
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