Gene Apar_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0135 
Symbol 
ID8412981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp153709 
End bp154593 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content51% 
IMG OID645021705 
Product(Formate-C-acetyltransferase)-activating enzyme 
Protein accessionYP_003179162 
Protein GI257783945 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.957254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTTCA CTGCAACAGA AACCGCTTTA GGAGCAACAC ATCCAACCGG GTGTGTTGCT 
CCTGTCAACA AGATTATTCC CTTCTCACTG GTAGATGGCC CAGGAAGCCG AACTGCCGTC
TTCCTTCAAG GCTGCAACAT TCGCTGCGCT TACTGCCATA ACCCTGAGAC TCAGGTGGAA
TGCATTTCTT GCCAGGCATG CGTCAAACCA TGCCCAGCTC ACGCTTTGTC TATGGCCAAT
GGAAAAGTTG TGTGGGACAA CTCTATCTGT ATCAACTGTG ACAACTGCAT CAAGGTTTGT
CAGCATAAAT CCACACCAAA AATTGAACTA CTCAGCGCAC GAGAAGTTGC TGATCGCTGC
ATTTCCAACA TGCCATTCAT CCGCGGAATC ACCACGTCAG GCGGTGAATG CATGCTCCGT
CCCGATTTCC TCTACGAGCT CTTCACCTAC TGCAATGCAG CAGGCCTAAG CTGCCTCATC
GACTCCAATG GCACCATCGA CTTCACTGAA TACCGCGACT TACTAGCCCT TTCGGACGGC
GTTATGCTTG ATGTTAAAGC TTGGGATGAT CAGTGGTATG AACATCTAAC TGGCGAGAAT
GGCGTCATAG TCCGCAAAAA TCTTGCTTTT TTGGCCGAGC AAAACAAGCT CGAAGAGGTT
CGCGTCATTG TGACCGAAGG TTGGAACGAC GCCGAAGCCG CAGTTGATGG AATTGCCTTA
ACGCTTGGCG AGAAGGTTGG TCAGACGCGC ATTCGTCTCA TGAAATTCAG GCACTTTGGC
GTTCGCGGTC CGATGGAGAA CTCTCCTTCT CCAAGCGACG AGCGTATGCG AGAAATCGAA
TCACAAGCCC GCAGCCTCGG CTTTGGTGAA GTTGTCGTCA GTTAA
 
Protein sequence
MTFTATETAL GATHPTGCVA PVNKIIPFSL VDGPGSRTAV FLQGCNIRCA YCHNPETQVE 
CISCQACVKP CPAHALSMAN GKVVWDNSIC INCDNCIKVC QHKSTPKIEL LSAREVADRC
ISNMPFIRGI TTSGGECMLR PDFLYELFTY CNAAGLSCLI DSNGTIDFTE YRDLLALSDG
VMLDVKAWDD QWYEHLTGEN GVIVRKNLAF LAEQNKLEEV RVIVTEGWND AEAAVDGIAL
TLGEKVGQTR IRLMKFRHFG VRGPMENSPS PSDERMREIE SQARSLGFGE VVVS