| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0133 |
|---|
| Symbol | |
|---|
| ID | 8412979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | + |
|---|
| Start bp | 151570 |
|---|
| End bp | 152784 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 645021703 |
|---|
| Product | iron-containing alcohol dehydrogenase |
|---|
| Protein accession | YP_003179160 |
|---|
| Protein GI | 257783943 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.78911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACGTT TTACTAATCC GCGCGATCTG TATTTTGGCG AGGGCGCTCG TCACGAGGTT
AAGAACCTCA AGGGCAAGAG AGCAGTTATC GTTTCTGGCG GCAGCTCTAT GCGTCGCGGC
GGCTTCCTTG ATGATGTTGA GAATGATCTC AAGTCCGCAG GTTTTGAGGT TGCTCACATT
GAGGGTGTCG AGTCCGATCC TTCTGTCGAG ACCGTTATGA ACGGTGCTGC TAAGATGTCT
GAGTTCCAGC CAGACTGGAT CATTGCTATT GGCGGCGGCT CTCCAATCGA CGCAGCTAAG
GCTATGTGGA TTAAGTACGA GTATCCAGAG ACCACGTTTG AGGACATGTG CAAGGTCTTC
GGTCTTCCTG AGCTCCGTAC CAAGGCTCAC TTCTGCGCAA TTTCTTCTAC TTCCGGTACC
GCAACTGAGG TAACCGCATT CTCCATCATT ACTGATTACC AGAAGGGCGT TAAGTACCCA
ATTGCTGACT TCCAGATTAC CCCTGACGTT GCAATTGTTG ACCCTGAGCT CACTTACGGC
ATGCCTGTTA AGCTTGTTGC TCATACTGGT ATGGACGCAC TGACTCATGC TATTGAGGCA
TATGTTTCTA CCGCTGCTTC TATGTACACT GACGGCGATG CTCTCCACGC AATTCGTGAG
ATTGTCGAGT GGCTGCCAAA GTCTTATGCA GGTGAGAAAG AGGGACGTCA GCACATGCAC
GACGCACAGT GCCTTGCTGG CATTGCATTC TCCTCTGGTC TTCTGGGTAT CGTTCACTCC
ATGGCTCACA AGACCGGCGC TGCATTCTCC GGCGGTCACA TCATCCACGG TTGTGCAAAC
GCTATGTACT TGGGCAAAGT CATTCAGTTC AACGCTCGTG ATGAGCGCGC AAAGGCTCGC
TATGCATTTA TTGCTAAGGA GATCCTGCAC CTTGAGGGCA ACACTGAAGA TGAGCTTGTA
GAGGCACTTG TCCAGAAGAT CCGCGACATC AACGATGCTC TTAACATCCC ACAGGGTATT
AAGAATTATG GCGAGGGTGG AACCAAGTCC GAGACCTCCA TCATTGACGA GAAAGAGTTC
TTCGAGAAGG CTCCAGAGGT TGCTCGCCTT GCTATTGAGG ATGCTTGCAC CCTTTCCAAC
CCACGCAAGC CTACCCAGGA GGAGATGGAG CAGCTGCTTA AGTGCGTCTA CTTCGATCTT
CCTGTCGAGT TCTAA
|
|---|
| Protein sequence | MGRFTNPRDL YFGEGARHEV KNLKGKRAVI VSGGSSMRRG GFLDDVENDL KSAGFEVAHI
EGVESDPSVE TVMNGAAKMS EFQPDWIIAI GGGSPIDAAK AMWIKYEYPE TTFEDMCKVF
GLPELRTKAH FCAISSTSGT ATEVTAFSII TDYQKGVKYP IADFQITPDV AIVDPELTYG
MPVKLVAHTG MDALTHAIEA YVSTAASMYT DGDALHAIRE IVEWLPKSYA GEKEGRQHMH
DAQCLAGIAF SSGLLGIVHS MAHKTGAAFS GGHIIHGCAN AMYLGKVIQF NARDERAKAR
YAFIAKEILH LEGNTEDELV EALVQKIRDI NDALNIPQGI KNYGEGGTKS ETSIIDEKEF
FEKAPEVARL AIEDACTLSN PRKPTQEEME QLLKCVYFDL PVEF
|
|---|
| |