| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0121 |
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| Symbol | |
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| ID | 8412965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 135534 |
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| End bp | 136535 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645021689 |
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| Product | HhH-GPD family protein |
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| Protein accession | YP_003179148 |
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| Protein GI | 257783931 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000756832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.180452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA AAATTTCACA TACAAAAACA AACGAAGACC TGGATACGGT GTCTGACATT
TCAACATCTT TATCCGATGA GCTTGCAGTT ACATTTAAAA AGACAGAGCT TACGACAGAG
CTACGTGCGT TTGTCGAGTC TGTGGCCAAA AAAGGCCGCG AGCTGTATCG CGATTTGCCT
TGGCGTCGCA CGTACGATCC ATATGCCATT TGGATTTCTG AGGTCATGCT TCAGCAGACG
CAGGTTAGTC GCGTAGATGG TCGCTGGCAG AGATGGTTGG AACACTTTCC AACGGTTGAT
GCGCTGGCTG CTGCCGCGCC TTCAGATGTA CTTGAAGAAT GGCAGGGCCT GGGCTACAAC
CGTCGAGCTT TGTCTGTACA TCGAGCTGCT CAAGCAATTT CTGAAGCAGG CGGAGTCTTT
CCACAAGATC AAAAGGAGCT CGTAAAGCTT CCAGGCATTG GTCCCGCTAC TGCAGCAGGT
ATTCGCGCGT TTGCGTTCAA TCTGCATGGC GTTTATTTGG AGACTAACGT TCGTACGGTT
TTCTTGCATG AGCTTTACCC GCAGGCAGAA GGAGTGCCAG ACTCTGAGCT TATTCCTCTT
GTTGAGCTGA CGTGCCCTGC GAGTGTTTCT ACCGCAGCGG GCACTGACAC AGCAAACGCT
GCTACAACGG AACTCACGCC GCGTAGCTGG TACTACGCCC TTCTCGACTA TGGCGCGTAC
CTGAAGAAAA CTATTCCCAA TCCTTCACGA AGGTCTAAAA GCCACGTCAA ACAGTCTCGC
TTTGAGGGCT CTCATCGGCA GAAGCGTGCT GAGCTTTTAC GCGTTCTTCT TGCCCACAAA
GATGAGGGTG GAGCAGAGTT TGAGACACTT CATCAGGAAC TCTGTCAGAT TGAGGTCCAT
GCCGGGCGAG AAACCCTTGA TGAGCAGGTT ACCCTTGGCT TACTTGAAGA ACTTGCGAAG
GAGGGCTTCT GTCAGAAAAA TGATGAATAT TGGTTGCCAT AA
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| Protein sequence | MKKKISHTKT NEDLDTVSDI STSLSDELAV TFKKTELTTE LRAFVESVAK KGRELYRDLP
WRRTYDPYAI WISEVMLQQT QVSRVDGRWQ RWLEHFPTVD ALAAAAPSDV LEEWQGLGYN
RRALSVHRAA QAISEAGGVF PQDQKELVKL PGIGPATAAG IRAFAFNLHG VYLETNVRTV
FLHELYPQAE GVPDSELIPL VELTCPASVS TAAGTDTANA ATTELTPRSW YYALLDYGAY
LKKTIPNPSR RSKSHVKQSR FEGSHRQKRA ELLRVLLAHK DEGGAEFETL HQELCQIEVH
AGRETLDEQV TLGLLEELAK EGFCQKNDEY WLP
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