Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0107 |
Symbol | |
ID | 8412950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 121170 |
End bp | 121718 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 645021674 |
Product | hypoxanthine phosphoribosyltransferase |
Protein accession | YP_003179134 |
Protein GI | 257783917 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0634] Hypoxanthine-guanine phosphoribosyltransferase |
TIGRFAM ID | [TIGR01203] hypoxanthine phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.576089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAGC TTCACCCTGA CATTCAGGAG ATTTTGCTCG AAGAACAAGA TATCAAGGAT ATTGTCAAGA GGGTGGGTGC AGAGATTACA CGTGACTACG CGGACAAGAA CCCTCTGGTC ATTGCCGTCC TTCGCGGAGC CGTTGTATTT ATGGCTGACA TCATGCGTGC CATTAAGTGC CCGCTTTCCA TTGATTTTAT GGCTGTTTCT AGCTATGGCG ACGGTGTTAA GAGTTCCGGT GTTGTGCGCA TTGTGAAGGA TCTTGATACA AAAATTGAAG GTCGTCACGT CATTATTGTT GAGGATGTTT TGGATTCGGG GTTGACCCTT TCCTACTTGG TGCGCATGCT CAAGTCTCGT AACCCTGCTT CCATTGAGAT TGCTGCATTC CTGGTTAAGG ACATTGAGGG AAAACGTCCT GCTATTGACC CTTGTTACGT AGGAACTCAC GTGCCTGACA AGTTTGTTGT TGGCTACGGC TTGGACTACG CTGAGCGCTA CCGCAACCTC CCATTTGTGG GCGTTTTGAA GCCTTCCGTA TACGAATAG
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Protein sequence | MAELHPDIQE ILLEEQDIKD IVKRVGAEIT RDYADKNPLV IAVLRGAVVF MADIMRAIKC PLSIDFMAVS SYGDGVKSSG VVRIVKDLDT KIEGRHVIIV EDVLDSGLTL SYLVRMLKSR NPASIEIAAF LVKDIEGKRP AIDPCYVGTH VPDKFVVGYG LDYAERYRNL PFVGVLKPSV YE
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