Gene Apar_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0107 
Symbol 
ID8412950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp121170 
End bp121718 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content48% 
IMG OID645021674 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_003179134 
Protein GI257783917 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.576089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGC TTCACCCTGA CATTCAGGAG ATTTTGCTCG AAGAACAAGA TATCAAGGAT 
ATTGTCAAGA GGGTGGGTGC AGAGATTACA CGTGACTACG CGGACAAGAA CCCTCTGGTC
ATTGCCGTCC TTCGCGGAGC CGTTGTATTT ATGGCTGACA TCATGCGTGC CATTAAGTGC
CCGCTTTCCA TTGATTTTAT GGCTGTTTCT AGCTATGGCG ACGGTGTTAA GAGTTCCGGT
GTTGTGCGCA TTGTGAAGGA TCTTGATACA AAAATTGAAG GTCGTCACGT CATTATTGTT
GAGGATGTTT TGGATTCGGG GTTGACCCTT TCCTACTTGG TGCGCATGCT CAAGTCTCGT
AACCCTGCTT CCATTGAGAT TGCTGCATTC CTGGTTAAGG ACATTGAGGG AAAACGTCCT
GCTATTGACC CTTGTTACGT AGGAACTCAC GTGCCTGACA AGTTTGTTGT TGGCTACGGC
TTGGACTACG CTGAGCGCTA CCGCAACCTC CCATTTGTGG GCGTTTTGAA GCCTTCCGTA
TACGAATAG
 
Protein sequence
MAELHPDIQE ILLEEQDIKD IVKRVGAEIT RDYADKNPLV IAVLRGAVVF MADIMRAIKC 
PLSIDFMAVS SYGDGVKSSG VVRIVKDLDT KIEGRHVIIV EDVLDSGLTL SYLVRMLKSR
NPASIEIAAF LVKDIEGKRP AIDPCYVGTH VPDKFVVGYG LDYAERYRNL PFVGVLKPSV
YE