Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0089 |
Symbol | |
ID | 8412932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 97858 |
End bp | 98505 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 645021656 |
Product | Redoxin domain protein |
Protein accession | YP_003179116 |
Protein GI | 257783899 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT TTGTAACAAA ATCCCTAACG TATGTCGTTG GCCTGGTTAT GGCAGTTACG TTAGCTGGAT GCAGTGTTGG CGGCACTGGC AACGCTGGCA ACACAGGTAA CACAACTGCT CCAACTGCCG AGCAGCAGAA TTCCGGTGCA GTTCCACCTG AGGCCGCATC AAAACTCCAT CTCAAGGACG GCGACACCTT CCCGGACTTC AAGGCAACAG ATATCTCTAA CGGTACTACT TACGACAATA AGGTTTTTGG ACAGAATAAG GTTACCGTTA TGACCTTCTG GTTCAATGGT TGCACTGGCT GTATTCAGGA GATGCCAATG CTCCAGGAGC TGGCTGAGAC CTATAAAGAC AAGGGTGTCA ATGTTCTGGG TGTAAATGCA GAGGCTGCAT ACACAGACGA TGCCAAGAAG GAAGCACTGG ATATCCTTAA GAAGCAGGGT GTTACTTACG GAAACCTTGC ACTTGATCCA CACAGTGATG GCGGCCATGT TATCGAAGGC CTGACAGCAT TCCCAACCAC TATGGTTATC GATCAGAACG GTAAGCTTGT AGGTGACCCA ATCACTGGTG GAGCCACCAA GCTTCAGGGT AGCGAGCTCC AGAAGCGTGT TGACCAGGCT CTTGCTCAGA CGAAGTAG
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Protein sequence | MKKFVTKSLT YVVGLVMAVT LAGCSVGGTG NAGNTGNTTA PTAEQQNSGA VPPEAASKLH LKDGDTFPDF KATDISNGTT YDNKVFGQNK VTVMTFWFNG CTGCIQEMPM LQELAETYKD KGVNVLGVNA EAAYTDDAKK EALDILKKQG VTYGNLALDP HSDGGHVIEG LTAFPTTMVI DQNGKLVGDP ITGGATKLQG SELQKRVDQA LAQTK
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