| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0074 |
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| Symbol | |
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| ID | 8412917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 83810 |
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| End bp | 85162 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645021641 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003179101 |
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| Protein GI | 257783884 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATAA CTTTTGCCGA GCTCGGGCTA AACGAGCAAA TTTTAGCGGG CGTTACAACG
CTTGGGTTTA GCGTGCCCAC TCCCGTTCAA ACTGCAGCAA TTCCTGCTGT CCTGGCGGGT
AAGGATGTTG TTGCATCTGC TCAAACAGGA ACGGGCAAAA CTGCAGCGTT TATGTTGCCT
ACGCTGCAGC GTATTGCTGT CGAGAAACAC GACAAAGCCG AGAAACCTGA CGGCAAACGC
AATGCAGCCG CCGAGCGCAA CGCAGTCGCC GAGCGCAACG CCAAACGCGG CACCGGCAAA
CGCAACGCGT ATCCTCGTGC GCTCATCGTT ACACCGACGA GAGAACTTGC AGCCCAAATT
GACAACGTTG CCAAAAGCGT TTGCGCATCC ACTGGTCAGC AAGCCGTCAT TGTCACAGGT
GGCGCTCACT ACAAACACCA GATAGCCGCG CTGCAAAAAG GTTGCGACGT GCTGGTGGCA
ACACCCGGCC GTTTGATTGA TCTTCTCGAC AAGAAGCATA CAAGCCTAGA GGACATCCAG
GTGCTGGTAC TCGATGAAGC AGACCGTATG CTTGACATGG GCTTTTGGCC AAGCGTGCAC
CGCATTATGG AACAGCTTCC CAAGGCACAT CAAACGTTGC TCTTCTCGGC AACGCTCCCC
GCGTCAATTA CGTCAACCAT AGATGCGCTG CTCAAAGACC CAGAGCGTAT CGAGATTGCA
AGAACCGGAC AAACTGCAGC AACAATCGAG CAACATTTGT GCTCAGTTAC CCAGGGACAA
AAACCGCAGC TCTTGAAGGC ACTTATCGAC TCGTTTGATC CTGCGCCAGA GCGCGTTTTG
GTCTTTTGCA GGACAAAGTC GCGCGTTGAT AGCATTTATA AAAACCTCAA AGCTGCAGGT
CTGAAAGTTG ATGTTATGCA TGCGGACCGT CCGCAAAAAG CTCGCGCAAA AGCTTTAGAT
CGATTCCGCA GCGCCTCTAT TCAAATTCTT GTTGCAACCG ACGTCATGAG CCGCGGCATT
GATATCCAGG GCATTGACGT CGTCATTAAC TTTGACGTAC CTCTTGACCC CGAGGATTAC
GTTCACCGCA TTGGCCGAAC GGGCCGTGCC GGAGCCACAG GTCAGGCCTA TACGTTCATG
GGACCAGACG AGGTTACGCC GCTTAGAGAG ATTGAGTACT TCACAAAAGC GTTAGTTCCT
GCATGGGATC TACCTGGCTT TGGGTATGAA ACAGGACGTA TTATTTTGCA GGCGTCTCGT
TCTACTTCCA AAACTACTCG TTCCATGTTT TCTGGCTCAA GAGCACGCGG AAGAAACTTT
GGTTTTAGCG GAAGATATGG ACGCCACACA TAA
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| Protein sequence | MEITFAELGL NEQILAGVTT LGFSVPTPVQ TAAIPAVLAG KDVVASAQTG TGKTAAFMLP
TLQRIAVEKH DKAEKPDGKR NAAAERNAVA ERNAKRGTGK RNAYPRALIV TPTRELAAQI
DNVAKSVCAS TGQQAVIVTG GAHYKHQIAA LQKGCDVLVA TPGRLIDLLD KKHTSLEDIQ
VLVLDEADRM LDMGFWPSVH RIMEQLPKAH QTLLFSATLP ASITSTIDAL LKDPERIEIA
RTGQTAATIE QHLCSVTQGQ KPQLLKALID SFDPAPERVL VFCRTKSRVD SIYKNLKAAG
LKVDVMHADR PQKARAKALD RFRSASIQIL VATDVMSRGI DIQGIDVVIN FDVPLDPEDY
VHRIGRTGRA GATGQAYTFM GPDEVTPLRE IEYFTKALVP AWDLPGFGYE TGRIILQASR
STSKTTRSMF SGSRARGRNF GFSGRYGRHT
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