Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0055 |
Symbol | |
ID | 8412897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 58519 |
End bp | 59505 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 645021621 |
Product | band 7 protein |
Protein accession | YP_003179082 |
Protein GI | 257783865 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTG AAAAAATTAT CAAATCCAAG AGTGGTTGGC TATTTTTGCT GATTGCTATT GCTCTTTTTG TAATAGCAGT CCTGTTTTTG GCAAATTTTG TGATTAGCGC TATAGCTGCA GATAGAAATC CTCGCCTGGA GCCATCGGTC CCAAGCATTA TTGGTGCGTT GGTTTTCTTC TTTGCTGGTT TGTTTGTTTC AAGCGGCTTG TTTAGTCTTC AGCCTGGTCA GGCAAGGGTT TGCGTGTTGT TTGGTAAGTA CATCGGAACC GTTAAGGACG AGGGCCTTCG CTGGGCAAAT CCTTACTACG CTAAGACTCT GTCCGCAGGC AACCTTTCCA CTCTTGTCAC AGTTGGAGAC ACTTCTAGCG TAAACGTGCA CACCTCTATC ATTTCTACTC GTGCTCGCAC GTTGAATGGC GATGTCCTCA AGGTTAATGA TCGCATGGGC AATCCAATCG AGATTGCTGA GGTAGTTGTT TGGCGTGTCA GCGATACCGC AAAGGCTCTC TTCGATGTGG ATGATTACGA TAGCTACGTT GCTATGCAGG CAGAGACTGC ACTTAGGCAC GTCGCTAGCA TTTACAGCTA CGACCACATG GAGGATGAAT CCGAGTCTAA TACCGCAATT ACCTTGCGTT CCAACATCGA GGAAGTCTCC GAGGCTCTTC AGTCTGAGTT GAGCCGCAAC CTTTCCGTTG CCGGTATTAC TGTCGACGAC GCCCGTCTCA CACATCTCTC TTATGCTCCT GAAATTGCAC AGGCAATGCT CCGTCGCCAG CAGGCAGAGG CCATCATTGC CGCACGTAAG AAGATCGTTG AGGGTGCCGT TTCCATGGTT GACATGGCTC TCACTCAGCT TTCCGAGAAT GGCGTTGTTG AGTTTGATGA AGACCGTAAG GCCGTTATGG CTTCTAACCT TATGGTTGTT CTCTGCGGCG AGTCTGAGGC TCAGCCTGTG CTTAACACTG GTTCTTTGCA GCAGTAA
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Protein sequence | MSTEKIIKSK SGWLFLLIAI ALFVIAVLFL ANFVISAIAA DRNPRLEPSV PSIIGALVFF FAGLFVSSGL FSLQPGQARV CVLFGKYIGT VKDEGLRWAN PYYAKTLSAG NLSTLVTVGD TSSVNVHTSI ISTRARTLNG DVLKVNDRMG NPIEIAEVVV WRVSDTAKAL FDVDDYDSYV AMQAETALRH VASIYSYDHM EDESESNTAI TLRSNIEEVS EALQSELSRN LSVAGITVDD ARLTHLSYAP EIAQAMLRRQ QAEAIIAARK KIVEGAVSMV DMALTQLSEN GVVEFDEDRK AVMASNLMVV LCGESEAQPV LNTGSLQQ
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