Gene Apar_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0048 
Symbol 
ID8412890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp51827 
End bp52816 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content42% 
IMG OID645021615 
ProductAbortive infection protein 
Protein accessionYP_003179076 
Protein GI257783859 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAA ATCGTATGTT TTCCGACGTC AAACTAGCAA AGAGACTAAC TCCGGCTTGG 
CTCAGTCCAT TTTTTGCTGC TCTGTTGATA GTTGCTGGAC AAATTGTTGG CGCTATTGTG
CTAGCTGTAT CAGCAGCCCT TCTCGCTGTC CCCTACTTCT TGAACAATCC TCAAATCGCA
AACAAACTTT CAAGTCCTAC TATCCTGCAA GAGCTTCTAG GAGATTACTA TCTTCTGCTC
TCACTCTTTT CCTTTATTTT TATTGCGGGT CTCTTTTTAC TATGGGTTAA GTTCTTTGAA
CAGCGTCCGA TTGTTACTCT GGGATTTTAT AAAGATAACT GGAAGAAAGA GCTTCTCAAG
GGCTTTGGCT TGGGACTTCT TCTCTTTTCT ATTTTAATGT TGATTCTAAT TTTGTCCGGA
TCCTATCAAT TTGTTGGCGC TACTTTTACG CCTTATGCCT TCGGTTTTGT TCTTATCACC
ATTCCTTTTT GGTTGATTCA AGGTGGAACA GAAGAACTTA TTACCAGAGG CTGGCTTCTT
CCTGTCATGG CAGAAAAATC CAACAAAATT ATTGCAATCG TAGTCTCAAG CAGTCTATTT
GGCCTTCTTC ATATCTTTAA CAGTGGCTTT ACCATGTTTT CTCTATTCAA TTTGATTCTC
TTTGGCGTCT TAGAAACGTT CTATATCATC AAAACCGACA ATCTTTGGGG AACTGCTGGC
ATTCATGGAG CTTGGAACTT TGCCCAAGGC AATCTTTTTG GCGTCCTGGT AAGCGGAAGT
GCGGCAGGTA GTTCTTTGCT GCGGTTTATT CCTGACAATG GGCAGGAATG GCTTACCGGC
GGCAATTTTG GCGCAGAGGG TTCCGCTGCT TGTACGCTTG TAATGCTGAT AACTATCCTG
ATTCTTGCCT ATCAGCTTAA AAAATCTGAC AAACTATTTG TAAAGAAATC TGCCGAGAAA
CTCGCTGAGC CCACAAGTGT TGACTTGTAA
 
Protein sequence
MQENRMFSDV KLAKRLTPAW LSPFFAALLI VAGQIVGAIV LAVSAALLAV PYFLNNPQIA 
NKLSSPTILQ ELLGDYYLLL SLFSFIFIAG LFLLWVKFFE QRPIVTLGFY KDNWKKELLK
GFGLGLLLFS ILMLILILSG SYQFVGATFT PYAFGFVLIT IPFWLIQGGT EELITRGWLL
PVMAEKSNKI IAIVVSSSLF GLLHIFNSGF TMFSLFNLIL FGVLETFYII KTDNLWGTAG
IHGAWNFAQG NLFGVLVSGS AAGSSLLRFI PDNGQEWLTG GNFGAEGSAA CTLVMLITIL
ILAYQLKKSD KLFVKKSAEK LAEPTSVDL