Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0048 |
Symbol | |
ID | 8412890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 51827 |
End bp | 52816 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 645021615 |
Product | Abortive infection protein |
Protein accession | YP_003179076 |
Protein GI | 257783859 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAAA ATCGTATGTT TTCCGACGTC AAACTAGCAA AGAGACTAAC TCCGGCTTGG CTCAGTCCAT TTTTTGCTGC TCTGTTGATA GTTGCTGGAC AAATTGTTGG CGCTATTGTG CTAGCTGTAT CAGCAGCCCT TCTCGCTGTC CCCTACTTCT TGAACAATCC TCAAATCGCA AACAAACTTT CAAGTCCTAC TATCCTGCAA GAGCTTCTAG GAGATTACTA TCTTCTGCTC TCACTCTTTT CCTTTATTTT TATTGCGGGT CTCTTTTTAC TATGGGTTAA GTTCTTTGAA CAGCGTCCGA TTGTTACTCT GGGATTTTAT AAAGATAACT GGAAGAAAGA GCTTCTCAAG GGCTTTGGCT TGGGACTTCT TCTCTTTTCT ATTTTAATGT TGATTCTAAT TTTGTCCGGA TCCTATCAAT TTGTTGGCGC TACTTTTACG CCTTATGCCT TCGGTTTTGT TCTTATCACC ATTCCTTTTT GGTTGATTCA AGGTGGAACA GAAGAACTTA TTACCAGAGG CTGGCTTCTT CCTGTCATGG CAGAAAAATC CAACAAAATT ATTGCAATCG TAGTCTCAAG CAGTCTATTT GGCCTTCTTC ATATCTTTAA CAGTGGCTTT ACCATGTTTT CTCTATTCAA TTTGATTCTC TTTGGCGTCT TAGAAACGTT CTATATCATC AAAACCGACA ATCTTTGGGG AACTGCTGGC ATTCATGGAG CTTGGAACTT TGCCCAAGGC AATCTTTTTG GCGTCCTGGT AAGCGGAAGT GCGGCAGGTA GTTCTTTGCT GCGGTTTATT CCTGACAATG GGCAGGAATG GCTTACCGGC GGCAATTTTG GCGCAGAGGG TTCCGCTGCT TGTACGCTTG TAATGCTGAT AACTATCCTG ATTCTTGCCT ATCAGCTTAA AAAATCTGAC AAACTATTTG TAAAGAAATC TGCCGAGAAA CTCGCTGAGC CCACAAGTGT TGACTTGTAA
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Protein sequence | MQENRMFSDV KLAKRLTPAW LSPFFAALLI VAGQIVGAIV LAVSAALLAV PYFLNNPQIA NKLSSPTILQ ELLGDYYLLL SLFSFIFIAG LFLLWVKFFE QRPIVTLGFY KDNWKKELLK GFGLGLLLFS ILMLILILSG SYQFVGATFT PYAFGFVLIT IPFWLIQGGT EELITRGWLL PVMAEKSNKI IAIVVSSSLF GLLHIFNSGF TMFSLFNLIL FGVLETFYII KTDNLWGTAG IHGAWNFAQG NLFGVLVSGS AAGSSLLRFI PDNGQEWLTG GNFGAEGSAA CTLVMLITIL ILAYQLKKSD KLFVKKSAEK LAEPTSVDL
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