| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0047 |
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| Symbol | |
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| ID | 8412889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 51279 |
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| End bp | 51773 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 645021614 |
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| Product | histidine triad (HIT) protein |
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| Protein accession | YP_003179075 |
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| Protein GI | 257783858 |
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| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTTTGA TTTGCGACCG AATTCAGATG ATTAAAGAAG GAAATAATCC TTATTTTGTC
AAAGAATTAG AAACAGGTTA CGTTGTTTTA GGAGATAACC AGCACTTTAA GGGATACACA
ATTTTTTTAT GTAAGCAACA TGCATCAGAA CTTCATGAGC TGAACACAGA CTTTAAACTA
AAGTTTCTTG AAGAGATGTC TCTTGTTGGG GAAGCGGTAT CGCACGCATT CCCTTGCGAG
AAAATGAACT ACGAGCTACT TGGCAACGGA GATTCCCATC TTCACTGGCA TTTGTTCCCT
AGGGTTGCCG GAGACCTAGA GGAATACGGT CATAATGGCA AAGGTCCTGT CTGGTGGTAT
CCCATGGAAA AGATGTATGA CAACTCCACC TGTCCTTCTC CAGAGGAATT AGAAACACTG
AAGTCAAAAC TTTCAATTGA ACTTACTAAG GTACTTTCAT CTACAGAAGA GAATCAAGGT
AACCAGATAC AATAG
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| Protein sequence | MCLICDRIQM IKEGNNPYFV KELETGYVVL GDNQHFKGYT IFLCKQHASE LHELNTDFKL
KFLEEMSLVG EAVSHAFPCE KMNYELLGNG DSHLHWHLFP RVAGDLEEYG HNGKGPVWWY
PMEKMYDNST CPSPEELETL KSKLSIELTK VLSSTEENQG NQIQ
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